Easyconfigs merge sprint 20150603

People

Name	Affiliation	Location	GitHub	IRC
Balazs	VUB	.be	@hajgato	vschajgato
Bart	VUB	.be	@Bart-CER	?
Fotis	freelance	.be/.uk	@fgeorgatos	fotis*
Kenneth	HPC-UGent	.be	@boegel	boegel
Lumír	VSB	.cz	@jas02	jas02
Markus	JSC	.de	@geimer	geimer
Pablo	SIB	.ch	@pescobar	pescobar
Robert	OHRI	.ca	@rjeschmi	rjeschmi
Thekla	CyI	.cy	@tloizou	?

Timetable

Slot (CET)	People
8am - 9am	Balazs
9am - 10am	Balazs, Kenneth, Lumír, Pablo
10am - 11am	Balazs, Kenneth, Lumír, Pablo, Thekla
11am - 12pm	Balazs, Kenneth, Lumír, Thekla
12pm - 1pm	Balazs, Kenneth, Lumír, Markus, Thekla
1pm - 2pm	Balazs, Fotis, Kenneth, Lumír, Markus, Thekla
2pm - 3pm	Balazs, Fotis, Kenneth, Lumír, Markus, Robert
3pm - 4pm	Balazs, Fotis, Kenneth, Lumír, Robert
4pm - 5pm	Balazs, Fotis, Kenneth, Lumír, Pablo, Robert
5pm - 6pm	Fotis, Kenneth, Pablo, Robert
6pm - 7pm	Fotis, (Kenneth)
7pm - 8pm	Fotis, Kenneth
8pm - 9pm	Kenneth
9pm - 10pm	Kenneth
10pm - 11pm	Kenneth

Tasks

• merging PRs: Kenneth
• test reports: Balazs, Robert, (Kenneth)
• reviewing: Balazs, Fotis, Robert
• make own PRs eligible: Bart, Balazs, Markus, Lumir, Pablo, Robert, Thekla

PRs of interest

Balazs

?

Fotis

life sciences; PRs by Thekla, Pablo

Kenneth

QIIME-related PRs

• OCaml/pplacer: https://github.com/hpcugent/easybuild-easyconfigs/pull/1056
• QIIME + deps: https://github.com/hpcugent/easybuild-easyconfigs/pull/1057

Markus

• Vampir: https://github.com/hpcugent/easybuild-easyconfigs/pull/512
• Score-P: https://github.com/hpcugent/easybuild-easyconfigs/pull/1026
• Scalasca + deps: https://github.com/hpcugent/easybuild-easyconfigs/pull/1375
• JUBE: https://github.com/hpcugent/easybuild-easyconfigs/pull/1396

Pablo

(bioinformatics)

• MOSAIK (https://github.com/hpcugent/easybuild-easyconfigs/pull/880)
• PBZIP2 (https://github.com/hpcugent/easybuild-easyconfigs/pull/1038)
• Bioperl (https://github.com/hpcugent/easybuild-easyconfigs/pull/1075)
• Pindel (https://github.com/hpcugent/easybuild-easyconfigs/pull/1126)
• Rpy2 (https://github.com/hpcugent/easybuild-easyconfigs/pull/1149)
• Trinity (https://github.com/hpcugent/easybuild-easyconfigs/pull/1427)
• TopHat (https://github.com/hpcugent/easybuild-easyconfigs/pull/1476)
• MuTect (https://github.com/hpcugent/easybuild-easyconfigs/pull/1483)
• PyMOL/GLEW (https://github.com/hpcugent/easybuild-easyconfigs/pull/1405)

Robert

cufflinks, tophat and bowtie

Thekla

https://github.com/hpcugent/easybuild-easyconfigs/pulls/tloizou

• pBWA (https://github.com/hpcugent/easybuild-easyconfigs/pull/1009)
• MAT I/O (https://github.com/hpcugent/easybuild-easyconfigs/pull/1004)
• DendroPy (https://github.com/hpcugent/easybuild-easyconfigs/pull/995)
• ABINIT (https://github.com/hpcugent/easybuild-easyconfigs/pull/727, https://github.com/hpcugent/easybuild-easyconfigs/pull/989)
  • note (@boegel): should be checked against https://github.com/hpcugent/easybuild-easyconfigs/pull/1551 (and https://github.com/hpcugent/easybuild-easyconfigs/pull/1650)
• Bismark (https://github.com/hpcugent/easybuild-easyconfigs/pull/990)