From b67c87012f2bd92270fd070b72cba0a5e7cdd28d Mon Sep 17 00:00:00 2001 From: Alexander Grund Date: Tue, 7 Feb 2023 17:10:45 +0100 Subject: [PATCH] Make ECs consistent --- .../easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-2.7.14.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-3.6.3.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11-intel-2017a-Python-2.7.13.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-2.7.14.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-3.6.3.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-2.7.14.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-3.6.4.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-2.7.15.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-3.6.6.eb | 2 +- .../c/CGAL/CGAL-4.11.1-intel-2018a-Python-2.7.14.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.14-foss-2019a-Python-3.7.2.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.14-intel-2019a-Python-3.7.2.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.14.1-foss-2019b-Python-3.7.4.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.14.1-intel-2019b-Python-3.7.4.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.14.3-gompi-2020a-Python-3.8.2.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.8-foss-2016a-Python-2.7.11.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.8-intel-2016a-Python-2.7.11.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b-Python-2.7.12.eb | 2 +- easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b-Python-2.7.12.eb | 2 +- easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.9-intel-2016b-Python-2.7.12.eb | 2 +- .../easyconfigs/c/CGAL/CGAL-4.9-intel-2017a-Python-2.7.13.eb | 2 +- easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-foss-2021b.eb | 2 +- easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-intel-2021b.eb | 2 +- easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.3-intel-2018a.eb | 3 ++- easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.4-foss-2018b.eb | 3 ++- .../s/SciPy-bundle/SciPy-bundle-2021.05-gomkl-2021a.eb | 2 +- easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.2.0.eb | 2 +- easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.3.0.eb | 2 +- .../v/vcflib/vcflib-1.0.2-GCC-9.3.0-Python-3.8.2.eb | 2 +- 31 files changed, 33 insertions(+), 31 deletions(-) diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-2.7.14.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-2.7.14.eb index ef8c14a24e0..d033267aef3 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-2.7.14.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-2.7.14.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-3.6.3.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-3.6.3.eb index 84989615633..be3206d85d4 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-3.6.3.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-foss-2017b-Python-3.6.3.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017a-Python-2.7.13.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017a-Python-2.7.13.eb index a954bcd3a8d..4d0b14dfd49 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017a-Python-2.7.13.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017a-Python-2.7.13.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-2.7.14.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-2.7.14.eb index 6e34c64e2f4..8ff6898f1ef 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-2.7.14.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-2.7.14.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-3.6.3.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-3.6.3.eb index a1da6f58d7d..36172cf0ebf 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-3.6.3.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11-intel-2017b-Python-3.6.3.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-2.7.14.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-2.7.14.eb index 41f7ebd36a8..a55803f816e 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-2.7.14.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-2.7.14.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-3.6.4.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-3.6.4.eb index 9946b69f647..ff0938352bb 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-3.6.4.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018a-Python-3.6.4.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-2.7.15.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-2.7.15.eb index 97c6dac0f01..180cab534a2 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-2.7.15.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-2.7.15.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-3.6.6.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-3.6.6.eb index 477357e8316..23ab0c1c4c6 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-3.6.6.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-foss-2018b-Python-3.6.6.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-intel-2018a-Python-2.7.14.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-intel-2018a-Python-2.7.14.eb index 4e9c29f1e82..0e700bf34ec 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-intel-2018a-Python-2.7.14.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.11.1-intel-2018a-Python-2.7.14.eb @@ -28,7 +28,7 @@ builddependencies = [ ('Eigen', '3.3.4', '', SYSTEM), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.14-foss-2019a-Python-3.7.2.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.14-foss-2019a-Python-3.7.2.eb index 348b69dc0fa..b9c2b1c3ada 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.14-foss-2019a-Python-3.7.2.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.14-foss-2019a-Python-3.7.2.eb @@ -29,7 +29,7 @@ dependencies = [ ('Qt5', '5.12.3'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.14-intel-2019a-Python-3.7.2.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.14-intel-2019a-Python-3.7.2.eb index 06e1bc27024..6aedf7b94d6 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.14-intel-2019a-Python-3.7.2.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.14-intel-2019a-Python-3.7.2.eb @@ -29,7 +29,7 @@ dependencies = [ ('Qt5', '5.12.3'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-foss-2019b-Python-3.7.4.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-foss-2019b-Python-3.7.4.eb index cb31a9c9548..ba65e66905e 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-foss-2019b-Python-3.7.4.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-foss-2019b-Python-3.7.4.eb @@ -29,7 +29,7 @@ dependencies = [ ('Qt5', '5.13.1'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-intel-2019b-Python-3.7.4.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-intel-2019b-Python-3.7.4.eb index a7df31832b5..d811e682a82 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-intel-2019b-Python-3.7.4.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.14.1-intel-2019b-Python-3.7.4.eb @@ -29,7 +29,7 @@ dependencies = [ ('Qt5', '5.13.1'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.14.3-gompi-2020a-Python-3.8.2.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.14.3-gompi-2020a-Python-3.8.2.eb index 1414729ac05..7260e3f71ab 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.14.3-gompi-2020a-Python-3.8.2.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.14.3-gompi-2020a-Python-3.8.2.eb @@ -29,7 +29,7 @@ dependencies = [ ('Qt5', '5.14.1'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.8-foss-2016a-Python-2.7.11.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.8-foss-2016a-Python-2.7.11.eb index 365336b722a..adb729af93e 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.8-foss-2016a-Python-2.7.11.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.8-foss-2016a-Python-2.7.11.eb @@ -22,7 +22,7 @@ dependencies = [ ('libGLU', '9.0.0', '-Mesa-11.2.1'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.8-intel-2016a-Python-2.7.11.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.8-intel-2016a-Python-2.7.11.eb index f3c87201222..a1dd733fbe6 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.8-intel-2016a-Python-2.7.11.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.8-intel-2016a-Python-2.7.11.eb @@ -22,7 +22,7 @@ dependencies = [ ('libGLU', '9.0.0', '-Mesa-11.2.1'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b-Python-2.7.12.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b-Python-2.7.12.eb index 1b7497c8401..a72147769ce 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b-Python-2.7.12.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b-Python-2.7.12.eb @@ -27,7 +27,7 @@ builddependencies = [ ('Eigen', '3.2.9'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b.eb index 32d7eeef907..43bf68bd47e 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-foss-2016b.eb @@ -25,7 +25,7 @@ builddependencies = [ ('Eigen', '3.2.9'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b-Python-2.7.12.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b-Python-2.7.12.eb index 0e7a9977726..18bb1a2753c 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b-Python-2.7.12.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b-Python-2.7.12.eb @@ -27,7 +27,7 @@ builddependencies = [ ('Eigen', '3.2.9'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b.eb index 5e36b73d080..f30cfbdd292 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.8.1-intel-2016b.eb @@ -25,7 +25,7 @@ builddependencies = [ ('Eigen', '3.2.9'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2016b-Python-2.7.12.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2016b-Python-2.7.12.eb index a6c2c50e9a6..6eeda75c0fc 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2016b-Python-2.7.12.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2016b-Python-2.7.12.eb @@ -27,7 +27,7 @@ builddependencies = [ ('Eigen', '3.3.3'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2017a-Python-2.7.13.eb b/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2017a-Python-2.7.13.eb index 75b9c8cc965..2c827ed9eda 100644 --- a/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2017a-Python-2.7.13.eb +++ b/easybuild/easyconfigs/c/CGAL/CGAL-4.9-intel-2017a-Python-2.7.13.eb @@ -27,7 +27,7 @@ builddependencies = [ ('Eigen', '3.3.3'), ] -configopts = r"-DOPENGL_INCLUDE_DIR=$EBROOTMESA/include\;$EBROOTLIBGLU/include " +configopts = '-DOPENGL_INCLUDE_DIR="$EBROOTMESA/include;$EBROOTLIBGLU/include" ' configopts += "-DOPENGL_gl_LIBRARY=$EBROOTMESA/lib/libGL.%s " % SHLIB_EXT configopts += "-DOPENGL_glu_LIBRARY=$EBROOTLIBGLU/lib/libGLU.%s " % SHLIB_EXT configopts += "-DWITH_ZLIB=ON -DWITH_MPFR=ON -DWITH_OpenGL=ON -DWITH_Eigen3=ON " diff --git a/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-foss-2021b.eb b/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-foss-2021b.eb index ce4c4f200c5..0546c798085 100644 --- a/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-foss-2021b.eb +++ b/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-foss-2021b.eb @@ -49,7 +49,7 @@ dependencies = [ ('HDF', '4.2.15'), ] -preconfigopts = "sed -e 's/-llapack/$LIBLAPACK/g' -i.eb configure && " +preconfigopts = r"sed -e 's/-llapack/\$LIBLAPACK/g' -i.eb configure && " configopts = '--with-expat=$EBROOTEXPAT --with-libz=$EBROOTLIBZ' configopts += ' --with-hdf5=$EBROOTHDF5 --with-netcdf=$EBROOTNETCDF' configopts += ' --with-xml2=yes --with-geos=$EBROOTGEOS/bin/geos-config --with-jpeg=$EBROOTLIBJPEGMINTURBO' diff --git a/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-intel-2021b.eb b/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-intel-2021b.eb index 51b0b329e86..4f817551b4a 100644 --- a/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-intel-2021b.eb +++ b/easybuild/easyconfigs/g/GDAL/GDAL-2.4.4-intel-2021b.eb @@ -49,7 +49,7 @@ dependencies = [ ('HDF', '4.2.15'), ] -preconfigopts = "sed -e 's/-llapack/$LIBLAPACK/g' -i.eb configure && " +preconfigopts = r"sed -e 's/-llapack/\$LIBLAPACK/g' -i.eb configure && " configopts = '--with-expat=$EBROOTEXPAT --with-libz=$EBROOTLIBZ' configopts += ' --with-hdf5=$EBROOTHDF5 --with-netcdf=$EBROOTNETCDF' configopts += ' --with-xml2=yes --with-geos=$EBROOTGEOS/bin/geos-config --with-jpeg=$EBROOTLIBJPEGMINTURBO' diff --git a/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.3-intel-2018a.eb b/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.3-intel-2018a.eb index 5cdbb696a9f..5987627dfb1 100644 --- a/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.3-intel-2018a.eb +++ b/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.3-intel-2018a.eb @@ -31,7 +31,8 @@ dependencies = [ extract_sources = True install_cmd = "cd %(builddir)s/hts-nim-*/ && nimble install --nimbleDir:%(installdir)s --verbose -y && " -install_cmd += r"cd ../mosdepth-*/ && sed -i 's/0\.2\.2/%(version)s/g' mosdepth.nimble && " +install_cmd += "cd ../mosdepth-*/ && " +install_cmd += r"sed -i 's/0\.2\.2/%(version)s/g' mosdepth.nimble && " install_cmd += "nimble install --nimbleDir:%(installdir)s --verbose -y" sanity_check_paths = { diff --git a/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.4-foss-2018b.eb b/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.4-foss-2018b.eb index c8c76363e57..b39e6fdc879 100644 --- a/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.4-foss-2018b.eb +++ b/easybuild/easyconfigs/m/mosdepth/mosdepth-0.2.4-foss-2018b.eb @@ -31,7 +31,8 @@ dependencies = [ extract_sources = True install_cmd = "cd %(builddir)s/hts-nim-*/ && nimble install --nimbleDir:%(installdir)s --verbose -y && " -install_cmd += r"cd ../mosdepth-*/ && sed -i 's/0\.2\.2/%(version)s/g' mosdepth.nimble && " +install_cmd += "cd ../mosdepth-*/ && " +install_cmd += r"sed -i 's/0\.2\.2/%(version)s/g' mosdepth.nimble && " install_cmd += "nimble install --nimbleDir:%(installdir)s --verbose -y" sanity_check_paths = { diff --git a/easybuild/easyconfigs/s/SciPy-bundle/SciPy-bundle-2021.05-gomkl-2021a.eb b/easybuild/easyconfigs/s/SciPy-bundle/SciPy-bundle-2021.05-gomkl-2021a.eb index 376258b56d1..3f0596710cc 100644 --- a/easybuild/easyconfigs/s/SciPy-bundle/SciPy-bundle-2021.05-gomkl-2021a.eb +++ b/easybuild/easyconfigs/s/SciPy-bundle/SciPy-bundle-2021.05-gomkl-2021a.eb @@ -55,7 +55,7 @@ exts_list = [ 'checksums': ['20179f0b66359792ea283b69aa16366419132f3b6cf3adadc0c48e2e8118e573'], }), ('pandas', '1.2.4', { - 'preinstallopts': r"""sed -i 's@extra_compile_args = \["-Werror"\]@extra_compile_args = []@g' setup.py && """, + 'preinstallopts': """sed -i 's@extra_compile_args = \\["-Werror"\\]@extra_compile_args = []@g' setup.py && """, 'checksums': ['649ecab692fade3cbfcf967ff936496b0cfba0af00a55dfaacd82bdda5cb2279'], }), ('mpmath', '1.2.1', { diff --git a/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.2.0.eb b/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.2.0.eb index 309b53a98ca..e6a30f87174 100644 --- a/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.2.0.eb +++ b/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.2.0.eb @@ -52,7 +52,7 @@ preconfigopts += " -e 's|SmithWatermanGotoh.h|smithwaterman/SmithWatermanGotoh.h preconfigopts += " -e 's|IntervalTree.h|intervaltree/IntervalTree.h|g'" preconfigopts += " -e 's|multichoose.h|multichoose/multichoose.h|g' -e 's|filevercmp.h|filevercmp/filevercmp.h|g'" preconfigopts += " -e 's|tabix.hpp|tabixpp/tabix.hpp|g' -e 's|Fasta.h|fastahack/Fasta.h|g'" -preconfigopts += " -e 's|disorder.h|smithwaterman/disorder.h|g' {} \\; && " +preconfigopts += r" -e 's|disorder.h|smithwaterman/disorder.h|g' {} \; && " postinstallcmds = ["cp -r %(builddir)s/%(name)s-%(version)s/scripts %(installdir)s"] diff --git a/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.3.0.eb b/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.3.0.eb index 3bdb2e54c3b..72046e18f73 100644 --- a/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.3.0.eb +++ b/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-10.3.0.eb @@ -52,7 +52,7 @@ preconfigopts += " -e 's|SmithWatermanGotoh.h|smithwaterman/SmithWatermanGotoh.h preconfigopts += " -e 's|IntervalTree.h|intervaltree/IntervalTree.h|g'" preconfigopts += " -e 's|multichoose.h|multichoose/multichoose.h|g' -e 's|filevercmp.h|filevercmp/filevercmp.h|g'" preconfigopts += " -e 's|tabix.hpp|tabixpp/tabix.hpp|g' -e 's|Fasta.h|fastahack/Fasta.h|g'" -preconfigopts += " -e 's|disorder.h|smithwaterman/disorder.h|g' {} \\; && " +preconfigopts += r" -e 's|disorder.h|smithwaterman/disorder.h|g' {} \; && " postinstallcmds = ["cp -r %(builddir)s/%(name)s-%(version)s/scripts %(installdir)s"] diff --git a/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-9.3.0-Python-3.8.2.eb b/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-9.3.0-Python-3.8.2.eb index 02c610e9a17..c5cca78049f 100644 --- a/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-9.3.0-Python-3.8.2.eb +++ b/easybuild/easyconfigs/v/vcflib/vcflib-1.0.2-GCC-9.3.0-Python-3.8.2.eb @@ -53,7 +53,7 @@ preconfigopts += " -e 's|SmithWatermanGotoh.h|smithwaterman/SmithWatermanGotoh.h preconfigopts += " -e 's|IntervalTree.h|intervaltree/IntervalTree.h|g'" preconfigopts += " -e 's|multichoose.h|multichoose/multichoose.h|g' -e 's|filevercmp.h|filevercmp/filevercmp.h|g'" preconfigopts += " -e 's|tabix.hpp|tabixpp/tabix.hpp|g' -e 's|Fasta.h|fastahack/Fasta.h|g'" -preconfigopts += " -e 's|disorder.h|smithwaterman/disorder.h|g' {} \\; && " +preconfigopts += r" -e 's|disorder.h|smithwaterman/disorder.h|g' {} \; && " postinstallcmds = ["cp -r %(builddir)s/%(name)s-%(version)s/scripts %(installdir)s"]