From a4ccf3a3862357698272d29cbee530bddeedb277 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bob=20Dr=C3=B6ge?= Date: Thu, 28 Mar 2024 10:54:22 +0100 Subject: [PATCH] add -flax-vector-conversions to dbarts compiler flags when building for Arm CPUs --- .../r/R-bundle-CRAN/R-bundle-CRAN-2023.12-foss-2023a.eb | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/easybuild/easyconfigs/r/R-bundle-CRAN/R-bundle-CRAN-2023.12-foss-2023a.eb b/easybuild/easyconfigs/r/R-bundle-CRAN/R-bundle-CRAN-2023.12-foss-2023a.eb index ff8c29774ff..82ab85aec92 100644 --- a/easybuild/easyconfigs/r/R-bundle-CRAN/R-bundle-CRAN-2023.12-foss-2023a.eb +++ b/easybuild/easyconfigs/r/R-bundle-CRAN/R-bundle-CRAN-2023.12-foss-2023a.eb @@ -64,6 +64,14 @@ local_ext_version_check = "pkgver = packageVersion('%(ext_name)s'); if (pkgver ! local_stop_msg = "stop('%(ext_name)s %(ext_version)s not installed, found ', pkgver, ' instead')" exts_filter = ("R -q --no-save", "%s { %s }" % (local_ext_version_check, local_stop_msg)) +# the dbarts extension needs an additional compiler flag on Arm systems to prevent "incompatible types" errors +# cfr. https://github.com/vdorie/dbarts/issues/66 +if ARCH == 'aarch64': + local_dbarts_preinstallopts = 'sed -i "s|-c partition_neon.c|-flax-vector-conversions -c partition_neon.c|"' + local_dbarts_preinstallopts += ' src/misc/Makefile && ' +else: + local_dbarts_preinstallopts = '' + # !! order of packages is important !! # packages updated on 10th December 2023 exts_list = [ @@ -2577,6 +2585,7 @@ exts_list = [ }), ('dbarts', '0.9-25', { 'checksums': ['39a78228ead17c92bd88fe5f959c888412a22a7cbbc0edfa9c09072b4182d870'], + 'preinstallopts': local_dbarts_preinstallopts, }), ('proftools', '0.99-3', { 'checksums': ['e034eb1531af54013143da3e15229e1d4c2260f8eb79c93846014db3bdefb724'],