diff --git a/easybuild/easyconfigs/s/Spectre/Spectre-0.2.1-foss-2023a.eb b/easybuild/easyconfigs/s/Spectre/Spectre-0.2.1-foss-2023a.eb new file mode 100644 index 00000000000..a2a82a58532 --- /dev/null +++ b/easybuild/easyconfigs/s/Spectre/Spectre-0.2.1-foss-2023a.eb @@ -0,0 +1,31 @@ +easyblock = 'PythonPackage' + +name = 'Spectre' +version = '0.2.1' + +homepage = 'https://github.com/fritzsedlazeck/Spectre' +description = """Spectre is a long read copy number variation (CNV) caller. Spectre is designed to detect large CNVs +(>100kb) in a couple of minutes depending on your hardware.""" + +toolchain = {'name': 'foss', 'version': '2023a'} + +source_urls = ['https://pypi.org/packages/source/s/spectre-cnv/'] +sources = [{'download_filename': 'spectre_cnv-%(version)s.tar.gz', 'filename': SOURCE_TAR_GZ}] +checksums = ['a5ab6487bdf239f4df0158632020d57be3cc78831e0fb1f41f27c5a79060cf5a'] + +dependencies = [ + ('Python', '3.11.3'), + ('SciPy-bundle', '2023.07'), + ('Pysam', '0.22.0'), + ('matplotlib', '3.7.2'), +] + +use_pip = True +download_dep_fail = True +sanity_pip_check = True + +sanity_check_commands = [ + "spectre --help", +] + +moduleclass = 'bio'