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platform="AMZ" ## It could be either "AMZ" for an EC2 like systems or "HPC" for cluster systems
cufflinks_run="nonGuided_Cufflinks" ## It could be either "nonGuided_Cufflinks" for reference non guided Cufflinks analysis or "refGeneGuided_Cufflinks" for the guided one
cuffmerge_run="nonGuided_Cuffmerge" ## It could be either "nonGuided_Cuffmerge" for reference non guided Cuffmerge analysis or "refGeneGuided_Cuffmerge" for the guided one