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restrepo_2019

Code associated with Hume et al. 2020: Fine-scale delineation of Symbiodiniaceae genotypes on a previously bleached central Red Sea reef system demonstrates a prevalence of coral host-specific associations

Python code: Curation of environmental data, ITS2 typee profiling data; braycurtis & unifrac between sample distance computation; temperature regression analyses; hierarchical clustering; univariate stats; ternary, venn, dendrogram and compound figure generation; GIS figure creation

R Code: PERMANOVA and Betadisper testing (multivariate stats)