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While it is easy to solve for the case of a dead kernel, in general if kernel is still running when re-opening we would not know if any given cell has already completed execution. We are exploring something to fix that in jupyter-server/jupyter_server#990 (comment)
I looked a bit more into this and because the timer is a function of cell metadata, even a hot fix would not be trivial (unless we store kernel/session ID in the cell metadata which would be rather noisy; this way we could compare if the currently running kernel - if any - is the kernel in which the cell execution started). Again, it looks like the best solution would be adopting jupyter-server/jupyter_server#990 (comment).
Steps to reproduce:
I would expect timer to not tick after reopening the notebook.
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