set image subdir for repo2docker

czi-catalystproject · May 30, 2024 · 4f3debe · 4f3debe
1 parent 96261f7
commit 4f3debe
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/.github/workflows/build_image.yml b/.github/workflows/build_image.yml
@@ -37,6 +37,10 @@ jobs:
         # Uncomment and modify the following line with your image name, otherwise no push will happen
         IMAGE_NAME: "2i2c/bioinfo-image"
 
+        # Tell repo2docker which subdirectory to examine
+        # ref: https://repo2docker.readthedocs.io/en/latest/usage.html#cmdoption-jupyter-repo2docker-subdir
+        REPO2DOCKER_EXTRA_ARGS: "--subdir image"
+
     # Lets us monitor disks getting full as images get bigger over time
     - name: Show how much disk space is left
       run: df -h