Add Cat-B calibration to OSA #1395
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '**' | |
| pull_request: | |
| env: | |
| MPLBACKEND: Agg | |
| PYTEST_ADDOPTS: --color=yes | |
| jobs: | |
| static-code-checks: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.11 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.11 | |
| - name: Run Ruff | |
| uses: chartboost/ruff-action@v1 | |
| tests: | |
| needs: static-code-checks | |
| strategy: | |
| matrix: | |
| include: | |
| - python-version: "3.9" | |
| - python-version: "3.10" | |
| - python-version: "3.11" | |
| extra-args: ['codecov'] | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Prepare environment file for Mamba installation | |
| env: | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| run: | | |
| # setup correct python version | |
| sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml | |
| - name: Setup Mamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: environment.yml | |
| cache-environment: true | |
| post-cleanup: 'all' | |
| - name: Build the package | |
| run: | | |
| pip install build | |
| python -m build | |
| - name: Install the package | |
| run: pip install .[test] | |
| - name: Install the package in editable mode | |
| run: pip install --editable .[test] | |
| - name: Tests with pytest | |
| env: | |
| COVERAGE_PROCESS_START: .coveragerc | |
| PYTHONPATH: . | |
| run: | | |
| # to measure coverage when using subprocess for testing scripts we create sitecustomize.py | |
| # as specified in https://coverage.readthedocs.io/en/latest/subprocess.html | |
| # to initialize the coverage start up. | |
| echo "create sitecustomize.py" | |
| echo "import coverage; coverage.process_startup()" > $PYTHONPATH/sitecustomize.py | |
| pytest --basetemp=test_osa -vv --cov --cov-report=xml src | |
| cat coverage.xml | |
| - name: Codecov | |
| uses: codecov/codecov-action@v3 | |
| if: contains(matrix.extra-args, 'codecov') |