From 52ffc382e7dd8bff393f76db4407472f3dda83df Mon Sep 17 00:00:00 2001 From: christopher crew baker <chriscrewbaker@gmail.com> Date: Fri, 28 Sep 2018 20:11:59 -0400 Subject: [PATCH] add dep files --- README.md | 110 ++++++++++++++-------------- docs/LICENSE-text.html | 2 +- docs/articles/faqs.html | 4 +- docs/articles/getting-started.html | 14 ++-- docs/articles/index.html | 2 +- docs/authors.html | 2 +- docs/index.html | 20 ++--- docs/news/index.html | 38 ++++++++-- docs/reference/auth.html | 5 +- docs/reference/index.html | 2 +- docs/reference/pull_incites.html | 5 +- docs/reference/pull_wos.html | 5 +- docs/reference/pull_wos_apply.html | 7 +- docs/reference/query_wos.html | 2 +- docs/reference/query_wos_apply.html | 7 +- docs/reference/read_wos_data.html | 5 +- docs/reference/wosr.html | 2 +- docs/reference/write_wos_data.html | 5 +- 18 files changed, 127 insertions(+), 110 deletions(-) diff --git a/README.md b/README.md index a9b9564..da25d61 100644 --- a/README.md +++ b/README.md @@ -48,49 +48,49 @@ query_wos(query, sid = sid) pull_wos(query, sid = sid) #> List of 9 #> $ publication :'data.frame': 548 obs. of 7 variables: -#> ..$ ut : chr [1:548] "WOS:000173956100001" ... -#> ..$ title : chr [1:548] "FMD and animal welfare" ... -#> ..$ journal : chr [1:548] "Veterinary Record" ... -#> ..$ date : Date[1:548], format: "2002-01-26" ... +#> ..$ ut : chr [1:548] "WOS:000186387100005" ... +#> ..$ title : chr [1:548] "Farm animal welfare: The interaction of et".. +#> ..$ journal : chr [1:548] "Animal Welfare" ... +#> ..$ date : Date[1:548], format: "2003-11-01" ... #> ..$ doi : chr [1:548] NA ... -#> ..$ tot_cites: num [1:548] 0 0 ... -#> ..$ abstract : chr [1:548] NA ... +#> ..$ tot_cites: int [1:548] 37 15 ... +#> ..$ abstract : chr [1:548] "Farm animal welfare has now been studied, ".. #> $ author :'data.frame': 1438 obs. of 7 variables: -#> ..$ ut : chr [1:1438] "WOS:000176714800003" ... -#> ..$ author_no : num [1:1438] 1 1 ... -#> ..$ display_name: chr [1:1438] "Nolen, RS" ... -#> ..$ first_name : chr [1:1438] "RS" ... -#> ..$ last_name : chr [1:1438] "Nolen" ... -#> ..$ email : chr [1:1438] NA ... -#> ..$ daisng_id : num [1:1438] 25184 ... +#> ..$ ut : chr [1:1438] "WOS:000186387100005" ... +#> ..$ author_no : int [1:1438] 1 2 ... +#> ..$ display_name: chr [1:1438] "Sandoe, P" ... +#> ..$ first_name : chr [1:1438] "P" ... +#> ..$ last_name : chr [1:1438] "Sandoe" ... +#> ..$ email : chr [1:1438] "pes@kvl.dk" ... +#> ..$ daisng_id : int [1:1438] 196427 3327343 ... #> $ address :'data.frame': 838 obs. of 7 variables: -#> ..$ ut : chr [1:838] "WOS:000182036200014" ... -#> ..$ addr_no : num [1:838] 1 1 ... -#> ..$ org_pref: chr [1:838] "University of Prince Edward Island" ... -#> ..$ org : chr [1:838] "Univ Prince Edward Isl" ... -#> ..$ city : chr [1:838] "Charlottetown" ... -#> ..$ state : chr [1:838] "PE" ... -#> ..$ country : chr [1:838] "Canada" ... +#> ..$ ut : chr [1:838] "WOS:000186387100005" ... +#> ..$ addr_no : int [1:838] 1 2 ... +#> ..$ org_pref: chr [1:838] "University of Copenhagen" ... +#> ..$ org : chr [1:838] "Royal Vet & Agr Univ" ... +#> ..$ city : chr [1:838] "Frederiksberg" ... +#> ..$ state : chr [1:838] NA ... +#> ..$ country : chr [1:838] "Denmark" ... #> $ author_address:'data.frame': 18 obs. of 3 variables: #> ..$ ut : chr [1:18] "WOS:000208276800197" ... -#> ..$ author_no: num [1:18] 1 2 ... -#> ..$ addr_no : num [1:18] 1 1 ... +#> ..$ author_no: int [1:18] 1 2 ... +#> ..$ addr_no : int [1:18] 1 1 ... #> $ jsc :'data.frame': 901 obs. of 2 variables: -#> ..$ ut : chr [1:901] "WOS:000173956100001" ... +#> ..$ ut : chr [1:901] "WOS:000186387100005" ... #> ..$ jsc: chr [1:901] "Veterinary Sciences" ... #> $ keyword :'data.frame': 2096 obs. of 2 variables: -#> ..$ ut : chr [1:2096] "WOS:000177154900014" ... -#> ..$ keyword: chr [1:2096] "animality" ... +#> ..$ ut : chr [1:2096] "WOS:000186387100005" ... +#> ..$ keyword: chr [1:2096] "animal welfare" ... #> $ keywords_plus :'data.frame': 2020 obs. of 2 variables: -#> ..$ ut : chr [1:2020] "WOS:000180265600060" ... -#> ..$ keywords_plus: chr [1:2020] "housing conditions" ... +#> ..$ ut : chr [1:2020] "WOS:000179260700001" ... +#> ..$ keywords_plus: chr [1:2020] "system" ... #> $ grant :'data.frame': 1 obs. of 3 variables: #> ..$ ut : chr "WOS:000208574800048" #> ..$ grant_agency: chr "Selcuk University Research Foundation" #> ..$ grant_id : chr "2000/062" #> $ doc_type :'data.frame': 642 obs. of 2 variables: -#> ..$ ut : chr [1:642] "WOS:000173956100001" ... -#> ..$ doc_type: chr [1:642] "Editorial Material" ... +#> ..$ ut : chr [1:642] "WOS:000186387100005" ... +#> ..$ doc_type: chr [1:642] "Article" ... ``` InCites @@ -108,17 +108,17 @@ uts <- c("000272272000015", "000272366800025", "000272877700013") # Download InCites data for those UTs pull_incites(uts) #> ut article_type tot_cites journal_expected_citations -#> 1.1 WOS:000272877700013 AA 1 3.3 -#> 1.2 WOS:000272366800025 AA 4 4.2 -#> 1.3 WOS:000272272000015 AA 2 8.8 +#> 1.1 WOS:000272877700013 AA 1 3.4 +#> 1.2 WOS:000272366800025 AA 4 4.3 +#> 1.3 WOS:000272272000015 AA 3 8.9 #> journal_act_exp_citations impact_factor avg_expected_rate percentile -#> 1.1 0.30 0.47 20 87 -#> 1.2 0.95 0.80 20 62 -#> 1.3 0.23 1.28 20 77 +#> 1.1 0.30 0.49 20 87 +#> 1.2 0.94 0.85 20 63 +#> 1.3 0.34 1.90 20 69 #> nci esi_most_cited_article hot_paper is_international_collab #> 1.1 0.05 FALSE FALSE FALSE #> 1.2 0.20 FALSE FALSE FALSE -#> 1.3 0.10 FALSE FALSE FALSE +#> 1.3 0.15 FALSE FALSE FALSE #> is_institution_collab is_industry_collab oa_flag #> 1.1 FALSE FALSE FALSE #> 1.2 FALSE FALSE FALSE @@ -135,32 +135,32 @@ wos <- pull_wos('TS = ("dog welfare")', sid = sid) # Download InCites data head(pull_incites(wos$publication$ut)) #> ut article_type tot_cites journal_expected_citations -#> 1.1 WOS:A1996VH04300002 AA 18 29.879 -#> 1.2 WOS:000425564500005 AA 0 0.022 -#> 1.3 WOS:000425532500001 R 0 0.333 -#> 1.4 WOS:000422961700001 AA 0 0.459 -#> 1.5 WOS:000422961000002 R 3 0.500 -#> 1.6 WOS:000422958400008 R 1 2.182 +#> 1.1 WOS:A1996VH04300002 AA 18 30.07 +#> 1.2 WOS:000435128900013 R 2 1.50 +#> 1.3 WOS:000432234000011 AA 0 0.12 +#> 1.4 WOS:000425564500005 AA 0 0.12 +#> 1.5 WOS:000425532500001 R 0 0.67 +#> 1.6 WOS:000422961700001 AA 0 0.64 #> journal_act_exp_citations impact_factor avg_expected_rate percentile -#> 1.1 0.60 1.8 18.945 23.7 -#> 1.2 0.00 1.8 0.066 100.0 -#> 1.3 0.00 2.2 0.267 100.0 -#> 1.4 0.00 -1.0 0.519 100.0 -#> 1.5 6.00 -1.0 0.940 9.8 -#> 1.6 0.46 -1.0 3.624 72.8 +#> 1.1 0.6 1.5 19.07 23.9 +#> 1.2 1.3 1.6 0.25 2.1 +#> 1.3 0.0 1.5 0.11 100.0 +#> 1.4 0.0 1.5 0.11 100.0 +#> 1.5 0.0 2.8 0.40 100.0 +#> 1.6 0.0 1.7 0.69 100.0 #> nci esi_most_cited_article hot_paper is_international_collab -#> 1.1 0.95 FALSE FALSE FALSE -#> 1.2 0.00 FALSE FALSE FALSE +#> 1.1 0.94 FALSE FALSE FALSE +#> 1.2 8.07 FALSE FALSE TRUE #> 1.3 0.00 FALSE FALSE FALSE #> 1.4 0.00 FALSE FALSE FALSE -#> 1.5 3.19 FALSE FALSE FALSE -#> 1.6 0.28 FALSE FALSE FALSE +#> 1.5 0.00 FALSE FALSE FALSE +#> 1.6 0.00 FALSE FALSE FALSE #> is_institution_collab is_industry_collab oa_flag #> 1.1 FALSE FALSE FALSE -#> 1.2 FALSE FALSE FALSE +#> 1.2 TRUE FALSE FALSE #> 1.3 FALSE FALSE FALSE -#> 1.4 FALSE FALSE TRUE -#> 1.5 FALSE FALSE TRUE +#> 1.4 FALSE FALSE FALSE +#> 1.5 FALSE FALSE FALSE #> 1.6 FALSE FALSE TRUE ``` diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html index 349d4b0..a673640 100644 --- a/docs/LICENSE-text.html +++ b/docs/LICENSE-text.html @@ -60,7 +60,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> diff --git a/docs/articles/faqs.html b/docs/articles/faqs.html index d6c3b96..0ad82e6 100644 --- a/docs/articles/faqs.html +++ b/docs/articles/faqs.html @@ -30,7 +30,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -121,7 +121,7 @@ <h3 class="hasAnchor"> <span class="st">"TS = dog AND PY = 2001-2010"</span>, <span class="st">"TS = dog AND PY = 2011-2018"</span> ) -results <-<span class="st"> </span><span class="kw">lapply</span>(queries, pull_wos)</code></pre></div> +results <-<span class="st"> </span><span class="kw"><a href="../reference/pull_wos_apply.html">pull_wos_apply</a></span>(queries)</code></pre></div> </div> <div id="there-are-some-fields-that-im-interested-in-that-pull_wos-doesnt-return--how-do-i-get-them" class="section level3"> <h3 class="hasAnchor"> diff --git a/docs/articles/getting-started.html b/docs/articles/getting-started.html index 0881c91..c645f99 100644 --- a/docs/articles/getting-started.html +++ b/docs/articles/getting-started.html @@ -30,7 +30,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -284,12 +284,12 @@ <h1>Getting started</h1> #> 1.5 1.16 -1.000 14.1 54 #> 1.6 NA -1.000 2.2 26 #> nci esi_most_cited_article hot_paper is_international_collab -#> 1.1 0.71 0 FALSE FALSE -#> 1.2 0.07 0 FALSE FALSE -#> 1.3 0.64 0 FALSE FALSE -#> 1.4 0.00 0 FALSE FALSE -#> 1.5 0.43 0 FALSE FALSE -#> 1.6 0.46 0 FALSE FALSE +#> 1.1 0.71 FALSE FALSE FALSE +#> 1.2 0.07 FALSE FALSE FALSE +#> 1.3 0.64 FALSE FALSE FALSE +#> 1.4 0.00 FALSE FALSE FALSE +#> 1.5 0.43 FALSE FALSE FALSE +#> 1.6 0.46 FALSE FALSE FALSE #> is_institution_collab is_industry_collab oa_flag #> 1.1 FALSE FALSE FALSE #> 1.2 FALSE FALSE FALSE diff --git a/docs/articles/index.html b/docs/articles/index.html index 2dd2379..f48756e 100644 --- a/docs/articles/index.html +++ b/docs/articles/index.html @@ -60,7 +60,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> diff --git a/docs/authors.html b/docs/authors.html index 6da4103..cf37544 100644 --- a/docs/authors.html +++ b/docs/authors.html @@ -60,7 +60,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> diff --git a/docs/index.html b/docs/index.html index 098da1d..8a45fbd 100644 --- a/docs/index.html +++ b/docs/index.html @@ -33,7 +33,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -168,9 +168,9 @@ <h2 class="hasAnchor"> <span class="co">#> 1.2 0.94 0.847 19.9964 62.59</span> <span class="co">#> 1.3 0.34 1.902 19.9964 69.25</span> <span class="co">#> nci esi_most_cited_article hot_paper is_international_collab</span> -<span class="co">#> 1.1 0.05 0 FALSE FALSE</span> -<span class="co">#> 1.2 0.20 0 FALSE FALSE</span> -<span class="co">#> 1.3 0.15 0 FALSE FALSE</span> +<span class="co">#> 1.1 0.05 FALSE FALSE FALSE</span> +<span class="co">#> 1.2 0.20 FALSE FALSE FALSE</span> +<span class="co">#> 1.3 0.15 FALSE FALSE FALSE</span> <span class="co">#> is_institution_collab is_industry_collab oa_flag</span> <span class="co">#> 1.1 FALSE FALSE FALSE</span> <span class="co">#> 1.2 FALSE FALSE FALSE</span> @@ -199,12 +199,12 @@ <h2 class="hasAnchor"> <span class="co">#> 1.5 0.00 2.805 0.3980 100.00</span> <span class="co">#> 1.6 0.00 1.654 0.6919 100.00</span> <span class="co">#> nci esi_most_cited_article hot_paper is_international_collab</span> -<span class="co">#> 1.1 0.94 0 FALSE FALSE</span> -<span class="co">#> 1.2 8.07 0 FALSE TRUE</span> -<span class="co">#> 1.3 0.00 0 FALSE FALSE</span> -<span class="co">#> 1.4 0.00 0 FALSE FALSE</span> -<span class="co">#> 1.5 0.00 0 FALSE FALSE</span> -<span class="co">#> 1.6 0.00 0 FALSE FALSE</span> +<span class="co">#> 1.1 0.94 FALSE FALSE FALSE</span> +<span class="co">#> 1.2 8.07 FALSE FALSE TRUE</span> +<span class="co">#> 1.3 0.00 FALSE FALSE FALSE</span> +<span class="co">#> 1.4 0.00 FALSE FALSE FALSE</span> +<span class="co">#> 1.5 0.00 FALSE FALSE FALSE</span> +<span class="co">#> 1.6 0.00 FALSE FALSE FALSE</span> <span class="co">#> is_institution_collab is_industry_collab oa_flag</span> <span class="co">#> 1.1 FALSE FALSE FALSE</span> <span class="co">#> 1.2 TRUE FALSE FALSE</span> diff --git a/docs/news/index.html b/docs/news/index.html index 955c228..e72fa96 100644 --- a/docs/news/index.html +++ b/docs/news/index.html @@ -60,7 +60,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -104,15 +104,38 @@ <h1>Changelog <small></small></h1> </div> - <div id="wosr-0-1-2" class="section level1"> + <div id="wosr-0-2-0" class="section level1"> <h1 class="page-header"> -<a href="#wosr-0-1-2" class="anchor"></a>wosr 0.1.2<small> 2018-07-27 </small> +<a href="#wosr-0-2-0" class="anchor"></a>wosr 0.2.0<small> 2018-09-27 </small> </h1> <div id="new-functions" class="section level2"> <h2 class="hasAnchor"> <a href="#new-functions" class="anchor"></a>New functions</h2> <ul> <li> +<code><a href="../reference/query_wos_apply.html">query_wos_apply()</a></code> and <code><a href="../reference/pull_wos_apply.html">pull_wos_apply()</a></code> added to issue multiple queries to the WoS API and pull the data for those queries, respectively</li> +</ul> +</div> +<div id="misc" class="section level2"> +<h2 class="hasAnchor"> +<a href="#misc" class="anchor"></a>Misc</h2> +<ul> +<li> +<code><a href="../reference/pull_wos.html">pull_wos()</a></code> now returns empty data frames instead of <code>NA</code> if the user’s query returns no results</li> +<li> +<code><a href="../reference/pull_wos.html">pull_wos()</a></code> explicitly casts all string fields to be character vectors, and <code><a href="../reference/pull_incites.html">pull_incites()</a></code> now correctly casts the <code>esi_most_cited_article</code> field to be a logical vector (instead of a numeric)</li> +</ul> +</div> +</div> + <div id="wosr-0-1-2" class="section level1"> +<h1 class="page-header"> +<a href="#wosr-0-1-2" class="anchor"></a>wosr 0.1.2<small> 2018-07-27 </small> +</h1> +<div id="new-functions-1" class="section level2"> +<h2 class="hasAnchor"> +<a href="#new-functions-1" class="anchor"></a>New functions</h2> +<ul> +<li> <code><a href="../reference/write_wos_data.html">write_wos_data()</a></code> and <code><a href="../reference/read_wos_data.html">read_wos_data()</a></code> added to write the data returned by <code><a href="../reference/pull_wos.html">pull_wos()</a></code> as a series of CSVs and to read those CSVs back into R</li> </ul> </div> @@ -129,9 +152,9 @@ <h2 class="hasAnchor"> <h1 class="page-header"> <a href="#wosr-0-1-1" class="anchor"></a>wosr 0.1.1<small> 2018-05-03 </small> </h1> -<div id="misc" class="section level2"> +<div id="misc-1" class="section level2"> <h2 class="hasAnchor"> -<a href="#misc" class="anchor"></a>Misc</h2> +<a href="#misc-1" class="anchor"></a>Misc</h2> <ul> <li>The InCites API was updated by Clarivate, including moving to a new endpoint URL and changing the order of fields returned by the “DocumentLevelMetricsByUT” method. Small changes to the internals of <code><a href="../reference/pull_incites.html">pull_incites()</a></code> were made to reflect this.</li> </ul> @@ -141,9 +164,9 @@ <h2 class="hasAnchor"> <h1 class="page-header"> <a href="#wosr-0-1-0" class="anchor"></a>wosr 0.1.0<small> 2018-02-06 </small> </h1> -<div id="new-functions-1" class="section level2"> +<div id="new-functions-2" class="section level2"> <h2 class="hasAnchor"> -<a href="#new-functions-1" class="anchor"></a>New functions</h2> +<a href="#new-functions-2" class="anchor"></a>New functions</h2> <ul> <li> <code><a href="../reference/auth.html">auth()</a></code> added to get a session ID from WoS API server</li> @@ -160,6 +183,7 @@ <h2 class="hasAnchor"> <div id="tocnav"> <h2>Contents</h2> <ul class="nav nav-pills nav-stacked"> + <li><a href="#wosr-0-2-0">0.2.0</a></li> <li><a href="#wosr-0-1-2">0.1.2</a></li> <li><a href="#wosr-0-1-1">0.1.1</a></li> <li><a href="#wosr-0-1-0">0.1.0</a></li> diff --git a/docs/reference/auth.html b/docs/reference/auth.html index 39f7d93..11548e5 100644 --- a/docs/reference/auth.html +++ b/docs/reference/auth.html @@ -66,7 +66,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -152,8 +152,7 @@ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examp <span class='co'># don't have to keep specifying them in your code:</span> <span class='fu'>Sys.setenv</span>(<span class='kw'>WOS_USERNAME</span> <span class='kw'>=</span> <span class='st'>"some_username"</span>, <span class='kw'>WOS_PASSWORD</span> <span class='kw'>=</span> <span class='st'>"some_password"</span>) <span class='fu'>auth</span>() -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> diff --git a/docs/reference/index.html b/docs/reference/index.html index 4430e72..72003b8 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -60,7 +60,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> diff --git a/docs/reference/pull_incites.html b/docs/reference/pull_incites.html index 8b670b3..4215440 100644 --- a/docs/reference/pull_incites.html +++ b/docs/reference/pull_incites.html @@ -67,7 +67,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -173,8 +173,7 @@ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examp <span class='fu'>pull_incites</span>(<span class='no'>uts</span>, <span class='kw'>key</span> <span class='kw'>=</span> <span class='st'>"some_key"</span>) <span class='fu'>pull_incites</span>(<span class='fu'>c</span>(<span class='st'>"000346263300011"</span>, <span class='st'>"000362312600021"</span>), <span class='kw'>key</span> <span class='kw'>=</span> <span class='st'>"some_key"</span>) -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> diff --git a/docs/reference/pull_wos.html b/docs/reference/pull_wos.html index ae3e8d1..9823de9 100644 --- a/docs/reference/pull_wos.html +++ b/docs/reference/pull_wos.html @@ -64,7 +64,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -212,8 +212,7 @@ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examp <span class='no'>query</span> <span class='kw'><-</span> <span class='st'>"TS = ((cadmium AND gill*) NOT Pisces)"</span> <span class='fu'><a href='query_wos.html'>query_wos</a></span>(<span class='no'>query</span>, <span class='kw'>sid</span> <span class='kw'>=</span> <span class='no'>sid</span>) <span class='co'># shows that there are 1,611 matching publications</span> <span class='fu'>pull_wos</span>(<span class='no'>query</span>, <span class='kw'>sid</span> <span class='kw'>=</span> <span class='no'>sid</span>) -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> diff --git a/docs/reference/pull_wos_apply.html b/docs/reference/pull_wos_apply.html index 73f945c..a2be1b2 100644 --- a/docs/reference/pull_wos_apply.html +++ b/docs/reference/pull_wos_apply.html @@ -63,7 +63,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -153,13 +153,12 @@ <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2> <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> <pre class="examples"><span class='co'># NOT RUN {</span> -<span class='no'>queries</span> <span class='kw'><-</span> <span class='fu'>c</span>(<span class='st'>'TS="dog welfare"'</span>, <span class='st'>'TS="cat welfare"'</span>) +<span class='no'>queries</span> <span class='kw'><-</span> <span class='fu'>c</span>(<span class='st'>'TS = "dog welfare"'</span>, <span class='st'>'TS = "cat welfare"'</span>) <span class='co'># we can name the queries so that these names appear in the queries data</span> <span class='co'># frame returned by pull_wos_apply():</span> <span class='fu'>names</span>(<span class='no'>queries</span>) <span class='kw'><-</span> <span class='fu'>c</span>(<span class='st'>"dog welfare"</span>, <span class='st'>"cat welfare"</span>) <span class='fu'>pull_wos_apply</span>(<span class='no'>queries</span>) -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> diff --git a/docs/reference/query_wos.html b/docs/reference/query_wos.html index ea73262..9525bef 100644 --- a/docs/reference/query_wos.html +++ b/docs/reference/query_wos.html @@ -65,7 +65,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> diff --git a/docs/reference/query_wos_apply.html b/docs/reference/query_wos_apply.html index 96fe6cd..67aa627 100644 --- a/docs/reference/query_wos_apply.html +++ b/docs/reference/query_wos_apply.html @@ -63,7 +63,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -152,10 +152,9 @@ <h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2> <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2> <pre class="examples"><span class='co'># NOT RUN {</span> -<span class='no'>queries</span> <span class='kw'><-</span> <span class='fu'>c</span>(<span class='st'>'TS="dog welfare"'</span>, <span class='st'>'TS="cat welfare"'</span>) +<span class='no'>queries</span> <span class='kw'><-</span> <span class='fu'>c</span>(<span class='st'>'TS = "dog welfare"'</span>, <span class='st'>'TS = "cat welfare"'</span>) <span class='fu'>query_wos_apply</span>(<span class='no'>queries</span>) -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> diff --git a/docs/reference/read_wos_data.html b/docs/reference/read_wos_data.html index 2df73a1..766a93f 100644 --- a/docs/reference/read_wos_data.html +++ b/docs/reference/read_wos_data.html @@ -65,7 +65,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -143,8 +143,7 @@ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examp <span class='fu'><a href='write_wos_data.html'>write_wos_data</a></span>(<span class='no'>wos_data</span>, <span class='st'>"."</span>) <span class='co'># Read data back into R</span> <span class='no'>wos_data</span> <span class='kw'><-</span> <span class='fu'>read_wos_data</span>(<span class='st'>"."</span>) -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> diff --git a/docs/reference/wosr.html b/docs/reference/wosr.html index 10225b2..0dd5d1d 100644 --- a/docs/reference/wosr.html +++ b/docs/reference/wosr.html @@ -63,7 +63,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> diff --git a/docs/reference/write_wos_data.html b/docs/reference/write_wos_data.html index ed68941..1940aa9 100644 --- a/docs/reference/write_wos_data.html +++ b/docs/reference/write_wos_data.html @@ -64,7 +64,7 @@ </button> <span class="navbar-brand"> <a class="navbar-link" href="../index.html">wosr</a> - <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.1.2</span> + <span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.2.0</span> </span> </div> @@ -148,8 +148,7 @@ <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examp <span class='co'># Write files to "wos-data" dir</span> <span class='fu'>dir.create</span>(<span class='st'>"wos-data"</span>) <span class='fu'>write_wos_data</span>(<span class='no'>wos_data</span>, <span class='st'>"wos-data"</span>) -<span class='co'># }</span><div class='input'> -</div></pre> +<span class='co'># }</span></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2>