diff --git a/docs/news/index.html b/docs/news/index.html index 0392d53..599d244 100644 --- a/docs/news/index.html +++ b/docs/news/index.html @@ -133,6 +133,9 @@

  • updated pull functions for population

  • added datasets for population

  • added dataset for mapping of data sources

    • +

  • updated README to describe new function specifications

    • +

  • added pattern to recognise variant dates on filename of README which changed in format for 2020-06-18 (from MM/DD to MM_DD) which caused an error

    • +

  • added codefactor checks CodeFactor

    • diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml index d726923..fee00da 100644 --- a/docs/pkgdown.yml +++ b/docs/pkgdown.yml @@ -3,7 +3,7 @@ pkgdown: 1.5.1 pkgdown_sha: ~ articles: model: model.html -last_built: 2020-06-19T12:08Z +last_built: 2020-06-19T12:58Z urls: reference: https://como-ph.github.io/comoparams/reference article: https://como-ph.github.io/comoparams/articles diff --git a/docs/reference/ph_calculate_cases.html b/docs/reference/ph_calculate_cases.html index d7440cd..d3682c7 100644 --- a/docs/reference/ph_calculate_cases.html +++ b/docs/reference/ph_calculate_cases.html @@ -156,8 +156,21 @@

    Value

    with CoMo model data structure requirements.

    Examples

    - 
    df <- ph_get_cases()
    #> Getting information on Google Drive directory structure of the DoH Data Drop for latest available data up to 2020-06-18.
    #> Error in curl::curl_download(url = link, destfile = destFile): HTTP error 403.
    ph_calculate_cases(df = df)
    #> Error: object of type 'closure' is not subsettable
    
-
    + 
    df <- ph_get_cases()
    #> Getting information on Google Drive directory structure of the DoH Data Drop for latest available data up to 2020-06-18.
    ph_calculate_cases(df = df)
    #> # A tibble: 170 x 4
+#>    repDate    cases deaths recovered
+#>    <date>     <dbl>  <dbl>     <dbl>
+#>  1 2020-01-01     0      0         0
+#>  2 2020-01-02     0      0         0
+#>  3 2020-01-03     0      0         0
+#>  4 2020-01-04     0      0         0
+#>  5 2020-01-05     0      0         0
+#>  6 2020-01-06     0      0         0
+#>  7 2020-01-07     0      0         0
+#>  8 2020-01-08     0      0         0
+#>  9 2020-01-09     0      0         0
+#> 10 2020-01-10     0      0         0
+#> # … with 160 more rows
    
+