make pme wiper compatible with pme parser #200
Workflow file for this run
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| name: Test package for linter issues and run tests | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| - development | |
| paths: | |
| - .github/workflows/test-package.yaml | |
| - setup.py | |
| - MANIFEST.in | |
| - ocean_data_parser/** | |
| - tests/** | |
| push: | |
| branches: | |
| - main | |
| - development | |
| paths: | |
| - setup.py | |
| - MANIFEST.in | |
| - ocean_data_parser/** | |
| - tests/** | |
| jobs: | |
| testing: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install poetry | |
| poetry install --with dev,geo | |
| - name: ruff check | |
| id: ruff_check | |
| run: poetry run ruff check --output-format=github . | |
| continue-on-error: true | |
| - name: ruff import sorting check | |
| id: ruff_imports | |
| run: poetry run ruff check --select I --output-format=github . | |
| continue-on-error: true | |
| - name: ruff format | |
| id: ruff_format | |
| run: poetry run ruff format --check . | |
| continue-on-error: true | |
| - name: Check for ruff issues | |
| if: steps.ruff_check.outcome == 'failure' || steps.ruff_imports.outcome == 'failure' || steps.ruff_format.outcome == 'failure' | |
| run: | | |
| echo "Some ruff steps failed. Please check the logs for more information.\n" | |
| echo "Some of the issues can be fixed by running the following commands:\n" | |
| echo " poetry run ruff check --fix . # for fixing all default issues" | |
| echo " poetry run ruff check --fix --select I . # for fixing import sorting issues" | |
| echo " poetry run ruff format . # for formatting the code" | |
| exit 1 | |
| - name: Review if metadata is updated | |
| uses: dorny/paths-filter@v3 | |
| continue-on-error: true | |
| id: changes | |
| with: | |
| base: ${{ github.base_ref }} | |
| ref: ${{ github.ref }} | |
| filters: | | |
| vocabularies: | |
| - 'ocean_data_parser/vocabularies/**' | |
| - 'ocean_data_parser/metatadata/**' | |
| - 'tests/test_metadata.py' | |
| changelog: | |
| - 'CHANGELOG.md' | |
| - name: Run tests with metadata tests | |
| if: steps.changes.outputs.vocabularies == 'true' | |
| run: poetry run pytest -W error::UserWarning --nerc-vocab -n auto | |
| - name: Run tests without metadata tests | |
| if: steps.changes.outputs.vocabularies == 'false' | |
| run: poetry run pytest -W error::UserWarning -k "not test_metadata" -n auto | |
| - name: Run benchmark | |
| run: poetry run pytest tests/run_benchmark.py --benchmark-json output.json | |
| - name: CHANGELOG updated check | |
| if: steps.changes.outputs.changelog == 'false' | |
| run: | | |
| echo "CHANGELOG.md update is required." | |
| exit 1 | |