From ba068e7d1a83cfe71470b7659d646782c08b0627 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Gordon=20J=2E=20K=C3=B6hn?= <gordon@koehn.net>
Date: Fri, 25 Oct 2024 10:07:38 +0200
Subject: [PATCH] try otherwise

---
 .github/workflows/test-snake.yml | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/test-snake.yml b/.github/workflows/test-snake.yml
index f56ddc6..54c0863 100644
--- a/.github/workflows/test-snake.yml
+++ b/.github/workflows/test-snake.yml
@@ -20,8 +20,6 @@ jobs:
         uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - name: Check snakefmt version
-        run: snakefmt --version
       
       # Run Super-Linter only on Snakefile and .smk files
       - name: Lint Snakefiles Only
@@ -30,7 +28,7 @@ jobs:
           VALIDATE_SNAKEMAKE_SNAKEFMT: true
           FILTER_REGEX_INCLUDE: '(^Snakefile$|.*\.smk$)' # Only include Snakefile and .smk files
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-          DISABLE_ERRORS: false
+          DISABLE_ERRORS: true
 
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4
@@ -51,6 +49,9 @@ jobs:
         run: |
           pip install -e .
           pip install pytest
+      - name: Snakemake Linting
+        run: |
+          snakefmt workflow/
 
       - name: Snakemake Testing
         run: |