diff --git a/scripts/amplicon_covs_click.py b/scripts/amplicon_covs_click.py index 7f99910..bfbf8e6 100644 --- a/scripts/amplicon_covs_click.py +++ b/scripts/amplicon_covs_click.py @@ -195,6 +195,9 @@ def make_cov_heatmap(cov_df, output=None): plt.xlabel("amplicon") plt.ylabel("sample") plt.title("Samples {}:{}".format(split_at, cov_df.shape[0] - 1)) + + print("Saving heatmap") + if output is not None: plt.savefig(output)