From d70bc555ef0294592e170258645e8b56a293504c Mon Sep 17 00:00:00 2001 From: nicola-calonaci Date: Sat, 6 Apr 2024 22:38:03 +0200 Subject: [PATCH] bug fixed in parallel execution --- .Rhistory | 2 +- R/classify.R | 2 -- 2 files changed, 1 insertion(+), 3 deletions(-) diff --git a/.Rhistory b/.Rhistory index 51eb942..b2295a5 100644 --- a/.Rhistory +++ b/.Rhistory @@ -1,4 +1,3 @@ -any(!is.integer(genomic_data$DNV)) any(!is.integer(genomic_data$NV)) any(!is.numeric(genomic_data$VAF)) any(is.na(gene)) @@ -510,3 +509,4 @@ names(x) names(x$classification) setwd('~/Documents/GitHub/CNAqc/') CNAqc:::advanced_phasing +INCOMMON::classify diff --git a/R/classify.R b/R/classify.R index 24c3870..fb1083f 100644 --- a/R/classify.R +++ b/R/classify.R @@ -102,8 +102,6 @@ classify = function(x, FUN = classify_single_mutation, x = x, mc.cores = num_cores) - - tests = do.call(rbind, tests) } else { tests = lapply(ids(x), function(id) {