From 7b809b0e1184fdbf34d28b0ce6672309200e6263 Mon Sep 17 00:00:00 2001 From: golu099 Date: Wed, 21 Dec 2022 13:07:02 -0500 Subject: [PATCH] RAM & Local disk updated for sufficient memory --- pipes/WDL/tasks/tasks_16S_amplicon.wdl | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pipes/WDL/tasks/tasks_16S_amplicon.wdl b/pipes/WDL/tasks/tasks_16S_amplicon.wdl index e174054df..07c8d59cd 100755 --- a/pipes/WDL/tasks/tasks_16S_amplicon.wdl +++ b/pipes/WDL/tasks/tasks_16S_amplicon.wdl @@ -260,9 +260,9 @@ task tax_analysis { File representative_seqs_qza File representative_table_qza String basename = basename(trained_classifier, '.qza') - Int memory_mb = 2000 + Int memory_mb = 5 Int cpu = 1 - Int disk_size_gb = ceil(2*size(trained_classifier, "GiB")) + 5 + Int disk_size_gb = 375 String docker = "quay.io/broadinstitute/qiime2:conda" } command <<< @@ -287,7 +287,7 @@ task tax_analysis { } runtime { docker: docker - memory: "${memory_mb} MiB" + memory: "7 GB" cpu: cpu disk: disk_size_gb + " GB" disks: "local-disk " + disk_size_gb + " HDD"