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test_and_deploy.yml
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name: tests
on:
push:
branches:
- main
tags:
- "v*" # Push events to matching v*, i.e. v1.0, v20.15.10
pull_request:
branches:
- main
workflow_dispatch:
jobs:
linting:
runs-on: ubuntu-latest
steps:
- uses: neuroinformatics-unit/actions/lint@v2
manifest:
name: Check Manifest
runs-on: ubuntu-latest
steps:
- uses: neuroinformatics-unit/actions/check_manifest@v2
test:
needs: [linting, manifest]
name: ${{ matrix.os }} py${{ matrix.python-version }}
runs-on: ${{ matrix.os }}
strategy:
matrix:
# Run all supported Python versions on linux
python-version: ["3.9", "3.10", "3.11"]
os: [ubuntu-latest]
# Include one windows and macos run
include:
- os: macos-latest
python-version: "3.10"
- os: windows-latest
python-version: "3.10"
steps:
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
# these libraries enable testing on Qt on linux
- uses: pyvista/setup-headless-display-action@v2
with:
qt: true
# cache atlases needed by the tests
- name: Cache Atlases
id: atlas-cache
uses: actions/cache@v3
with:
path: | # ensure we don't cache any interrupted atlas download and extraction!
~/.brainglobe/*
!~/.brainglobe/atlas.tar.gz
key: ${{ runner.os }}-cached-atlases
enableCrossOsArchive: false # ~ and $HOME evaluate to different places across OSs!
- if: ${{ steps.atlas-cache.outputs.cache-hit == 'true' }}
name: List files in brainglobe data folder # good to be able to sanity check that user data is as expected
run: |
ls -af ~/.brainglobe/
# Run tests
- uses: neuroinformatics-unit/actions/test@v2
with:
python-version: ${{ matrix.python-version }}
build_sdist_wheels:
name: Build source distribution
needs: [test]
if: github.event_name == 'push' && github.ref_type == 'tag'
runs-on: ubuntu-latest
steps:
- uses: neuroinformatics-unit/actions/build_sdist_wheels@v2
upload_all:
name: Publish build distributions
needs: [build_sdist_wheels]
runs-on: ubuntu-latest
steps:
- uses: actions/download-artifact@v3
with:
name: artifact
path: dist
- uses: pypa/[email protected]
with:
user: __token__
password: ${{ secrets.TWINE_API_KEY }}