From 409963337fa1a92daf32e0717f6585c4bb7fd153 Mon Sep 17 00:00:00 2001 From: niksirbi Date: Thu, 17 Oct 2024 11:47:00 +0100 Subject: [PATCH 1/3] reorganised blackcap scripts into subfolders in examples --- examples/{ => blackcap}/BlackCap_build_template.sh | 0 examples/{ => blackcap}/BlackCap_post_build.py | 0 examples/{ => blackcap}/BlackCap_prep_highres.py | 0 examples/{ => blackcap}/BlackCap_prep_lowres.py | 0 examples/{ => blackcap}/BlackCap_source_images.py | 0 examples/{ => slurm}/slurm_batch_across_average_types.sh | 0 examples/{ => slurm}/slurm_batch_across_templates.sh | 0 examples/{ => slurm}/slurm_build_template.sh | 0 examples/{ => slurm}/slurm_post_build.sh | 0 9 files changed, 0 insertions(+), 0 deletions(-) rename examples/{ => blackcap}/BlackCap_build_template.sh (100%) rename examples/{ => blackcap}/BlackCap_post_build.py (100%) rename examples/{ => blackcap}/BlackCap_prep_highres.py (100%) rename examples/{ => blackcap}/BlackCap_prep_lowres.py (100%) rename examples/{ => blackcap}/BlackCap_source_images.py (100%) rename examples/{ => slurm}/slurm_batch_across_average_types.sh (100%) rename examples/{ => slurm}/slurm_batch_across_templates.sh (100%) rename examples/{ => slurm}/slurm_build_template.sh (100%) rename examples/{ => slurm}/slurm_post_build.sh (100%) diff --git a/examples/BlackCap_build_template.sh b/examples/blackcap/BlackCap_build_template.sh similarity index 100% rename from examples/BlackCap_build_template.sh rename to examples/blackcap/BlackCap_build_template.sh diff --git a/examples/BlackCap_post_build.py b/examples/blackcap/BlackCap_post_build.py similarity index 100% rename from examples/BlackCap_post_build.py rename to examples/blackcap/BlackCap_post_build.py diff --git a/examples/BlackCap_prep_highres.py b/examples/blackcap/BlackCap_prep_highres.py similarity index 100% rename from examples/BlackCap_prep_highres.py rename to examples/blackcap/BlackCap_prep_highres.py diff --git a/examples/BlackCap_prep_lowres.py b/examples/blackcap/BlackCap_prep_lowres.py similarity index 100% rename from examples/BlackCap_prep_lowres.py rename to examples/blackcap/BlackCap_prep_lowres.py diff --git a/examples/BlackCap_source_images.py b/examples/blackcap/BlackCap_source_images.py similarity index 100% rename from examples/BlackCap_source_images.py rename to examples/blackcap/BlackCap_source_images.py diff --git a/examples/slurm_batch_across_average_types.sh b/examples/slurm/slurm_batch_across_average_types.sh similarity index 100% rename from examples/slurm_batch_across_average_types.sh rename to examples/slurm/slurm_batch_across_average_types.sh diff --git a/examples/slurm_batch_across_templates.sh b/examples/slurm/slurm_batch_across_templates.sh similarity index 100% rename from examples/slurm_batch_across_templates.sh rename to examples/slurm/slurm_batch_across_templates.sh diff --git a/examples/slurm_build_template.sh b/examples/slurm/slurm_build_template.sh similarity index 100% rename from examples/slurm_build_template.sh rename to examples/slurm/slurm_build_template.sh diff --git a/examples/slurm_post_build.sh b/examples/slurm/slurm_post_build.sh similarity index 100% rename from examples/slurm_post_build.sh rename to examples/slurm/slurm_post_build.sh From 2eb8a9d388cb122f841041fba1b5093dbda3d4a7 Mon Sep 17 00:00:00 2001 From: niksirbi Date: Thu, 17 Oct 2024 11:51:00 +0100 Subject: [PATCH 2/3] renamed example scripts --- .../blackcap/{BlackCap_source_images.py => 1_source_images.py} | 0 examples/blackcap/{BlackCap_prep_lowres.py => 2_prep_lowres.py} | 0 examples/blackcap/{BlackCap_prep_highres.py => 3_prep_highres.py} | 0 .../{BlackCap_build_template.sh => 4_BlackCap_build_template.sh} | 0 .../blackcap/{BlackCap_post_build.py => 5_BlackCap_post_build.py} | 0 ...atch_across_average_types.sh => batch_across_average_types.sh} | 0 ...{slurm_batch_across_templates.sh => batch_across_templates.sh} | 0 examples/slurm/{slurm_build_template.sh => build_template.sh} | 0 examples/slurm/{slurm_post_build.sh => post_build.sh} | 0 ...{downsample_source_images.py => 1_downsample_source_images.py} | 0 10 files changed, 0 insertions(+), 0 deletions(-) rename examples/blackcap/{BlackCap_source_images.py => 1_source_images.py} (100%) rename examples/blackcap/{BlackCap_prep_lowres.py => 2_prep_lowres.py} (100%) rename examples/blackcap/{BlackCap_prep_highres.py => 3_prep_highres.py} (100%) rename examples/blackcap/{BlackCap_build_template.sh => 4_BlackCap_build_template.sh} (100%) rename examples/blackcap/{BlackCap_post_build.py => 5_BlackCap_post_build.py} (100%) rename examples/slurm/{slurm_batch_across_average_types.sh => batch_across_average_types.sh} (100%) rename examples/slurm/{slurm_batch_across_templates.sh => batch_across_templates.sh} (100%) rename examples/slurm/{slurm_build_template.sh => build_template.sh} (100%) rename examples/slurm/{slurm_post_build.sh => post_build.sh} (100%) rename examples/tadpole/{downsample_source_images.py => 1_downsample_source_images.py} (100%) diff --git a/examples/blackcap/BlackCap_source_images.py b/examples/blackcap/1_source_images.py similarity index 100% rename from examples/blackcap/BlackCap_source_images.py rename to examples/blackcap/1_source_images.py diff --git a/examples/blackcap/BlackCap_prep_lowres.py b/examples/blackcap/2_prep_lowres.py similarity index 100% rename from examples/blackcap/BlackCap_prep_lowres.py rename to examples/blackcap/2_prep_lowres.py diff --git a/examples/blackcap/BlackCap_prep_highres.py b/examples/blackcap/3_prep_highres.py similarity index 100% rename from examples/blackcap/BlackCap_prep_highres.py rename to examples/blackcap/3_prep_highres.py diff --git a/examples/blackcap/BlackCap_build_template.sh b/examples/blackcap/4_BlackCap_build_template.sh similarity index 100% rename from examples/blackcap/BlackCap_build_template.sh rename to examples/blackcap/4_BlackCap_build_template.sh diff --git a/examples/blackcap/BlackCap_post_build.py b/examples/blackcap/5_BlackCap_post_build.py similarity index 100% rename from examples/blackcap/BlackCap_post_build.py rename to examples/blackcap/5_BlackCap_post_build.py diff --git a/examples/slurm/slurm_batch_across_average_types.sh b/examples/slurm/batch_across_average_types.sh similarity index 100% rename from examples/slurm/slurm_batch_across_average_types.sh rename to examples/slurm/batch_across_average_types.sh diff --git a/examples/slurm/slurm_batch_across_templates.sh b/examples/slurm/batch_across_templates.sh similarity index 100% rename from examples/slurm/slurm_batch_across_templates.sh rename to examples/slurm/batch_across_templates.sh diff --git a/examples/slurm/slurm_build_template.sh b/examples/slurm/build_template.sh similarity index 100% rename from examples/slurm/slurm_build_template.sh rename to examples/slurm/build_template.sh diff --git a/examples/slurm/slurm_post_build.sh b/examples/slurm/post_build.sh similarity index 100% rename from examples/slurm/slurm_post_build.sh rename to examples/slurm/post_build.sh diff --git a/examples/tadpole/downsample_source_images.py b/examples/tadpole/1_downsample_source_images.py similarity index 100% rename from examples/tadpole/downsample_source_images.py rename to examples/tadpole/1_downsample_source_images.py From 775bd47de4a4eda383add2c8593d9c468068532e Mon Sep 17 00:00:00 2001 From: niksirbi Date: Thu, 17 Oct 2024 11:57:43 +0100 Subject: [PATCH 3/3] corrected named in two scripts --- .../{4_BlackCap_build_template.sh => 4_build_template.sh} | 0 examples/blackcap/{5_BlackCap_post_build.py => 5_post_build.py} | 0 2 files changed, 0 insertions(+), 0 deletions(-) rename examples/blackcap/{4_BlackCap_build_template.sh => 4_build_template.sh} (100%) rename examples/blackcap/{5_BlackCap_post_build.py => 5_post_build.py} (100%) diff --git a/examples/blackcap/4_BlackCap_build_template.sh b/examples/blackcap/4_build_template.sh similarity index 100% rename from examples/blackcap/4_BlackCap_build_template.sh rename to examples/blackcap/4_build_template.sh diff --git a/examples/blackcap/5_BlackCap_post_build.py b/examples/blackcap/5_post_build.py similarity index 100% rename from examples/blackcap/5_BlackCap_post_build.py rename to examples/blackcap/5_post_build.py