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Error in which(x <= 10^floor(log10(x)) * nice)[[1]] : subscript out of bounds #36

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zhanglm07 opened this issue Aug 13, 2020 · 0 comments

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@zhanglm07
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when i run /piPipes rnaseq2, the program was interrupted. The error message is:
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: ‘gdata’

The following object is masked from ‘package:stats’:

nobs

The following object is masked from ‘package:utils’:

object.size

The following object is masked from ‘package:base’:

startsWith

Loading required package: ggplot2
Loading required package: grid
Loading required package: ggthemes
Loading required package: scales
Error in which(x <= 10^floor(log10(x)) * nice)[[1]] :
subscript out of bounds
Calls: roundUp
In addition: Warning messages:
1: In max(sample$eff_counts.x, sample$eff_counts.y) :
no non-missing arguments to max; returning -Inf
2: In roundUp(10 * (max(sample$eff_counts.x, sample$eff_counts.y))) :
NaNs produced
3: In which(x <= 10^floor(log10(x)) * nice) : NaNs produced
Execution halted

Should I change any parameters? Thank you very much!

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