thresholds updates

bobeobibo · Feb 12, 2020 · 531a748 · 531a748
1 parent 3faed05
commit 531a748
Show file tree

Hide file tree

Showing 12 changed files with 14 additions and 13 deletions.
diff --git a/README.md b/README.md
@@ -1,4 +1,4 @@
-# Phigaro v2.2.0
+# Phigaro v2.2.1
 
 ## Updates tracker
 You can find the information about updates and releases by [link.](https://github.com/bobeobibo/phigaro/blob/master/version_tracker.md)

diff --git a/config.yml b/config.yml
@@ -6,12 +6,12 @@ phigaro:
   mean_gc: 0.46354823199323625
   penalty_black: 2.2
   penalty_white: 0.7
-  threshold_max_abs: 11.42
+  threshold_max_abs: 52.96
   threshold_max_basic: 46.0
-  threshold_max_without_gc: 52.96
-  threshold_min_abs: 11.28
+  threshold_max_without_gc: 11.42
+  threshold_min_abs: 50.32
   threshold_min_basic: 45.39
-  threshold_min_without_gc: 52.32
+  threshold_min_without_gc: 11.28
   window_len: 32
 prodigal:
   bin: /root/miniconda3/bin/prodigal
diff --git a/dist/phigaro-2.2.1-py2.py3-none-any.whl b/dist/phigaro-2.2.1-py2.py3-none-any.whl
diff --git a/dist/phigaro-2.2.1.tar.gz b/dist/phigaro-2.2.1.tar.gz
diff --git a/dist/phigaro-2.2.0-py2.py3-none-any.whl → ...rsions/phigaro-2.2.0-py2.py3-none-any.whl b/dist/phigaro-2.2.0-py2.py3-none-any.whl → ...rsions/phigaro-2.2.0-py2.py3-none-any.whl
diff --git a/dist/phigaro-2.2.0.tar.gz → dist_old_versions/phigaro-2.2.0.tar.gz b/dist/phigaro-2.2.0.tar.gz → dist_old_versions/phigaro-2.2.0.tar.gz
diff --git a/phigaro/_version.py b/phigaro/_version.py
@@ -1,4 +1,4 @@
 """Version information."""
 
 # The following line *must* be the last in the module, exactly as formatted:
-__version__ ="2.2.0"
+__version__ ="2.2.1"
diff --git a/phigaro/const.py b/phigaro/const.py
@@ -1,10 +1,10 @@
 DEFAULT_WINDOW_SIZE = 32
 DEFAULT_THRESHOLD_MIN_BASIC = 45.39
 DEFAULT_THRESHOLD_MAX_BASIC = 46.0
-DEFAULT_THRESHOLD_MIN_ABS = 11.28
-DEFAULT_THRESHOLD_MAX_ABS = 11.42
-DEFAULT_THRESHOLD_MIN_WITHOUT_GC = 52.32
-DEFAULT_THRESHOLD_MAX_WITHOUT_GC = 52.96
+DEFAULT_THRESHOLD_MIN_ABS = 50.32
+DEFAULT_THRESHOLD_MAX_ABS = 52.96
+DEFAULT_THRESHOLD_MIN_WITHOUT_GC = 11.28
+DEFAULT_THRESHOLD_MAX_WITHOUT_GC = 11.42
 DEFAULT_MEAN_GC = 0.46354823199323626
 DEFAULT_MAX_EVALUE = 0.00445
 DEFAULT_PENALTY_BLACK = 2.2

diff --git a/prepare_and_publish_package.bat b/prepare_and_publish_package.bat
@@ -13,6 +13,7 @@ set /P commit_name="Please, make up the commit name:"
 set /p tag=<tag_name
 git commit -m %commit_name%
 git tag %tag%
+pause
 git push
 git push --tags
 "C:\Program Files (x86)\Google\Chrome\Application\chrome.exe" https://github.com/bobeobibo/phigaro/actions

diff --git a/setup.py b/setup.py
@@ -10,7 +10,7 @@
                   'is based on phage genes HMMs and a smoothing window algorithm.',
       long_description=long_description,
       long_description_content_type="text/markdown",
-      version="2.2.0",
+      version="2.2.1",
       license='MIT',
       author='E.Starikova, N.Pryanichnikov, P.Tikhonova',
       author_email='[email protected]',

diff --git a/tag_name b/tag_name
@@ -1 +1 @@
-v2.2.0
+v2.2.1
diff --git a/test_data_gitaction/latest_version.txt b/test_data_gitaction/latest_version.txt
@@ -1 +1 @@
-https://github.com/bobeobibo/phigaro/raw/master/dist/phigaro-2.2.0.tar.gz
+https://github.com/bobeobibo/phigaro/raw/master/dist/phigaro-2.2.1.tar.gz
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		https://github.com/bobeobibo/phigaro/raw/master/dist/phigaro-2.2.0.tar.gz
		https://github.com/bobeobibo/phigaro/raw/master/dist/phigaro-2.2.1.tar.gz