From 137da3a84dee6628b02e49d78ea85a4854ec9ce0 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Lars=20Sch=C3=B6ning?= Date: Thu, 28 Jan 2016 11:48:06 +0100 Subject: [PATCH] chore: remove stale file --- tests.py | 34 ---------------------------------- 1 file changed, 34 deletions(-) delete mode 100644 tests.py diff --git a/tests.py b/tests.py deleted file mode 100644 index 780a59a..0000000 --- a/tests.py +++ /dev/null @@ -1,34 +0,0 @@ -from pprint import pprint -from gnomic import Genotype, Organism - -ast = Genotype.parse('site>plasmidA{abc} -{a:b} -{first second} -plasmidB{} +{P.y:gene.dd} +X Y(variant)' # insertion - # 'p1{x:y }::m+ ' # plasmid - # 'p2{a}::m(R) ' # plasmid alt - # 'p3{} ' # plasmid no content - # 'site>p4{} ' # plasmid integrated - # 'a>b ' # replacement - # 'a>E.coli/b(variant)::m+ ' - # '-del ' # deletion - # '-del::bX+ ' - # '-p5{} ' - # 'X(v)' - ) # phenotype) - -print(Genotype.is_valid('sdassfs df=fwer34')) -print() -pprint(ast) - -print() -pprint(ast.added_features) -pprint(ast.removed_features) -print() -pprint(ast.added_plasmids) -pprint(ast.removed_plasmids) -print() -pprint(ast.added_fusion_features) -pprint(ast.removed_fusion_features) -print() -#print(json.dumps(ast, indent=2, cls=GnomicJSONEncoder)) # ASTs are JSON-friendy - - -# TODO type bindings, organism bindings