Merge pull request #651 from biolink/go-site-2079-gorule-0000002-no-n…

…ot-annotations-to-binding For #2079 added check for binding
biolink · Oct 13, 2023 · bb796ff · bb796ff
2 parents 3d0bc79 + 05d9a32
commit bb796ff
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/ontobio/io/qc.py b/ontobio/io/qc.py
@@ -178,11 +178,11 @@ def repair(self, annotation: association.GoAssociation, group=None) -> Tuple[Lis
 class GoRule02(GoRule):
 
     def __init__(self):
-        super().__init__("GORULE:0000002", "No 'NOT' annotations to 'protein binding ; GO:0005515'", FailMode.HARD)
+        super().__init__("GORULE:0000002", "No 'NOT' annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'", FailMode.HARD)
 
     def test(self, annotation: association.GoAssociation, config: assocparser.AssocParserConfig, group=None) -> TestResult:
-
-        fails = (str(annotation.object.id) == "GO:0005515" and annotation.negated)
+        annotation_obj_id = str(annotation.object.id)
+        fails = ((annotation_obj_id == "GO:0005488" or annotation_obj_id == "GO:0005515") and annotation.negated)
         return self._result(not fails)