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Updating parsers #77

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mortonjt opened this issue Nov 2, 2016 · 0 comments

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mortonjt commented Nov 2, 2016 •

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We need all of the following parsers to be implemented here using the newest scikit-bio IntervalMetadata object.

Genbank (@RNAer)
GFF (@RNAer)
infernal (@sjanssen2)
hmmer (@sjanssen2)
embl (@RNAer)
aragorn
Tandem repeat: Tandem Repeat Finder (https://tandem.bu.edu/trf/trf.html)
rho-independent transcription terminators: TransTermHP (http://transterm.cbcb.umd.edu/)

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