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Updates from production, Support for new human-filtering impl #141

Merged
merged 15 commits into from
Jun 13, 2024
Merged

Updates from production, Support for new human-filtering impl #141

merged 15 commits into from
Jun 13, 2024

Commits on Jun 11, 2024

  1. Updates from production, Support for new human-filtering impl 

    Updates from production.
Support for new MOVI-based human-filtering implementation.
    @charles-cowart
    charles-cowart committed Jun 11, 2024
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Commits on Jun 12, 2024

  1. Partial parameterization

    @charles-cowart
    charles-cowart committed Jun 12, 2024
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  2. Removed legacy QCJob, updates for NuQCJob 

    Removed legacy QCJob from the current source tree as it's no longer
needed.
Updates for NuQCJob including the use of MMI files based on machine and
assay-type based configuration.
    @charles-cowart
    charles-cowart committed Jun 12, 2024
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Commits on Jun 13, 2024

  1. Additional updates

    @charles-cowart
    charles-cowart committed Jun 13, 2024
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  2. Added test

    @charles-cowart
    charles-cowart committed Jun 13, 2024
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  3. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  4. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  5. remove comment

    @charles-cowart
    charles-cowart committed Jun 13, 2024
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  6. Merge branch 'movi_day' of https://github.com/charles-cowart/mg-scripts… 

    … into movi_day
    @charles-cowart
    charles-cowart committed Jun 13, 2024
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  7. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  8. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  9. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  10. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  11. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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  12. Update sequence_processing_pipeline/templates/nuqc_job.sh 

    Co-authored-by: Daniel McDonald <[email protected]>
    @charles-cowart @wasade
    charles-cowart and wasade authored Jun 13, 2024
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