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Update nextstrain-cli to 5.0.0 #37627

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Update nextstrain-cli to 5.0.0 #37627

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Update nextstrain-cli: 4.2.0 → 5.0.0

install with bioconda Conda

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Recipe recipes/nextstrain-cli (click to view/edit other files)
Summary The Nextstrain command-line interface (CLI)
Home https://docs.nextstrain.org/projects/cli/
Releases https://pypi.org/pypi/nextstrain-cli/json
Recipe Maintainer(s) @tsibley, @corneliusroemer

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 26, 2022
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tsibley commented Oct 26, 2022

This auto-generated PR won't be correct/sufficient because there were dependency changes between Nextstrain CLI 4.2.0 and 5.0.0.

Avoiding this sort of thing is why I proposed bioconda/bioconda-utils#697, but that looks like it won't be merged. For reference, our own issue to track the "deps don't auto-update" problem is nextstrain#1.

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tsibley commented Oct 26, 2022 •
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@BiocondaBot please close

(Guess that doesn't work. Shucks.)

tsibley added a commit to nextstrain/bioconda-recipes that referenced this pull request Oct 26, 2022
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Update nextstrain-cli to 5.0.0
ca7b8eb 
Supersedes <bioconda#37627>.
@tsibley tsibley mentioned this pull request Oct 26, 2022
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tsibley added a commit to nextstrain/bioconda-recipes that referenced this pull request Oct 26, 2022
@tsibley
Update nextstrain-cli to 5.0.0
478f108 
Supersedes <bioconda#37627>.
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tsibley commented Oct 26, 2022

Superseded by #37644.

BiocondaBot pushed a commit that referenced this pull request Oct 26, 2022
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[ci skip] Merge PR 37644
3db36bb 
Merge PR #37644, commits were: 
 * Update nextstrain-cli to 5.0.0

Supersedes <#37627>.
@BiocondaBot BiocondaBot deleted the bump/nextstrain_cli branch October 26, 2022 19:17
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