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I was using the sci-demux and the newer versions of Nextflow default to using DSL2 (https://www.nextflow.io/docs/latest/dsl2.html) which has removed certain operators (like into). This resulted in a silent error in failing to make good_sample_sheet
A work around was to add the line nextflow.enable.dsl=1 to my config file.
Either rewriting the nextflow code to remove the deprecated operators or altering the README to suggest the change to the .config might be in order.
Thanks!
The text was updated successfully, but these errors were encountered:
I was using the sci-demux and the newer versions of Nextflow default to using DSL2 (https://www.nextflow.io/docs/latest/dsl2.html) which has removed certain operators (like
into
). This resulted in a silent error in failing to makegood_sample_sheet
A work around was to add the line
nextflow.enable.dsl=1
to my config file.Either rewriting the nextflow code to remove the deprecated operators or altering the README to suggest the change to the .config might be in order.
Thanks!
The text was updated successfully, but these errors were encountered: