diff --git a/pyproject.toml b/pyproject.toml
index d1cd818d..ada33688 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -98,7 +98,12 @@ sphinx-docs = ["Sphinx", "sphinx-rtd-theme"]
 vector-db-based = ["langchain", "openai", "cohere", "tiktoken"]
 sql = ["sqlalchemy"]
 
+[tool.isort]
+skip = ["__init__.py"]  # TODO: Remove after this is fixed: https://github.com/airbytehq/airbyte-python-cdk/issues/12
+
 [tool.ruff]
+exclude = ["__init__.py"]  # TODO: Remove after this is fixed: https://github.com/airbytehq/airbyte-python-cdk/issues/12
+
 # Setting python version to at least 3.10 avoids `from __future__ import annotations`.
 target-version = "py310"
 # This is consistent with airbytehq/airbyte root pyproject.toml Black rule defined.