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accesor-tidytree docs #28

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nick-youngblut opened this issue Nov 24, 2022 · 0 comments
Open

accesor-tidytree docs #28

nick-youngblut opened this issue Nov 24, 2022 · 0 comments

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@nick-youngblut
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While https://yulab-smu.top/treedata-book/chapter2.html#accesor-tidytree is very helpful, one is still left wondering after reading this section:

  • How does one list all nodes labels/numbers or branch length?
    • Must one just resort to conversion to a tibble just to get values from 1 column in the table?
  • How does one list all internal/leaf nodes?
    • This is especially confusing/challenging since conversion of a tbl_tree object to a tibble drops the isTip column
    • This is important for functions such as treeio::drop.tip
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