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Issues list

feature request: LLM generated gene sets
#745 opened Nov 27, 2024 by zia1138
Unable to Convert Pathway ID to Gene Set
#743 opened Nov 21, 2024 by DarioS
enrichKEGG issue：the Description column and ID information are identical in 4.10.0
#742 opened Nov 19, 2024 by onmyojiyys
1
how to install clusterProfiler 4.2.2 version?
#740 opened Nov 11, 2024 by toddey
2
smth wrong with enrichGO
#737 opened Oct 30, 2024 by tsoshukming
1
Meta-analysis Functionality is Not Available
#734 opened Oct 22, 2024 by DarioS
Mitochondrial Genes and Annotations missing from EnrichGO
#733 opened Oct 21, 2024 by Dragonmasterx87
3
How to run enrichment analysis of metabolites using clusterProfier
#731 opened Oct 15, 2024 by Krithika-Bhuvan
1
how to compare different conditions
#730 opened Sep 30, 2024 by Flu09
enrichWP is not working for a few organisms
#729 opened Sep 30, 2024 by prateekgv
3
gofilter function ERROR: object 'topNode' not found
#728 opened Sep 29, 2024 by yulchen810
1
Error: unable to open database file Traceback:
#727 opened Sep 27, 2024 by jmzhang1911
1
clusterProfiler: BgRatio N value does not equal set gene universe size
#723 opened Sep 13, 2024 by fafaris39
1
using compareCluster to compare gene sets from different species
#722 opened Sep 13, 2024 by lanasushko
1
problem with gseGO()
#721 opened Aug 31, 2024 by Flu09
1
Question about GO terms in clusterProfiler
#720 opened Aug 22, 2024 by shuaizh117
3
RStudio is crashing when running compareCluster
#719 opened Aug 22, 2024 by nfancy
7 of 8 tasks
1
Can't install clusterProfiler 4.12.3 on R-4.4.0
#717 opened Aug 21, 2024 by davetang
4 of 6 tasks
1
ridgePlot Axis Ticks Spacing is Sometimes Insufficient
#716 opened Aug 19, 2024 by DarioS
1
dplyr and clusterprofile version 4.10.1
#714 opened Aug 9, 2024 by lzy604
1
ERROR in enrichGO,when seting ont = "ALL",Error in data.frame(..., check.names = FALSE) : 行名里有缺失值。
#713 opened Aug 6, 2024 by XIANZHE-LI
1
KEGG analysis of metabolites
#712 opened Jul 30, 2024 by Echo-ylq
2
Unable to install r package for clusterProfiler
#711 opened Jul 23, 2024 by shaliniC23
1
enrichKegg function, qvalueCutoff not working, getting as well non-significant results
#710 opened Jul 22, 2024 by nina-hahn
4
gseKEGG function running indefinitely with a gene list of over 3000 genes
#709 opened Jul 21, 2024 by Sophia409
1
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