Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Enhancement: QC: Find outliers #36

Open
AMChalkie opened this issue Sep 16, 2016 · 1 comment
Open

Enhancement: QC: Find outliers #36

AMChalkie opened this issue Sep 16, 2016 · 1 comment

Comments

@AMChalkie
Copy link

For QC I want to see if others would find this useful: I think it would be nice to see all genes where one replicate is a large distance from the others. So if you have values of 100,100,8000 for a given gene in a given condition it would be useful to highlight this. My reasoning is that if a sample has a a few of these it might point to problems in sample prep/sex matching.

@drpowell
Copy link
Member

I think you find these best with the MDS plot - and looking at the new "Gene" plot when hovering on genes.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants