From c3d1bc6560ed0eb8d13e90fdb29ee77dca84cfd6 Mon Sep 17 00:00:00 2001
From: Cecilia Sensalari <57489957+Cecilia-Sensalari@users.noreply.github.com>
Date: Tue, 2 Apr 2024 18:58:40 +0200
Subject: [PATCH] Add support for Read the Docs v2 (#60)

* Add yaml and requirements to doc

* Moved readthedocs yaml
---
 .gitignore                  |  2 +-
 .readthedocs.yaml           | 15 +++++++++++++++
 doc/source/requirements.txt |  2 ++
 3 files changed, 18 insertions(+), 1 deletion(-)
 create mode 100644 .readthedocs.yaml
 create mode 100644 doc/source/requirements.txt

diff --git a/.gitignore b/.gitignore
index af54cc4..d4f7df3 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,4 +1,4 @@
 __pycache__
 .vscode
 .nextflow
-doc/source/html
+doc/outdir
diff --git a/.readthedocs.yaml b/.readthedocs.yaml
new file mode 100644
index 0000000..f85fa81
--- /dev/null
+++ b/.readthedocs.yaml
@@ -0,0 +1,15 @@
+version: 2
+
+build:
+  os: "ubuntu-22.04"
+  tools:
+    python: "3.12"
+
+# Build from the docs/ directory with Sphinx
+sphinx:
+  configuration: doc/source/conf.py
+
+# Explicitly set the version of Python and its requirements
+python:
+  install:
+    - requirements: doc/source/requirements.txt
\ No newline at end of file
diff --git a/doc/source/requirements.txt b/doc/source/requirements.txt
new file mode 100644
index 0000000..857695b
--- /dev/null
+++ b/doc/source/requirements.txt
@@ -0,0 +1,2 @@
+sphinx==7.2.6
+sphinx_rtd_theme==2.0.0