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GO enrichment integral update #18

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nicomaper opened this issue Nov 22, 2023 · 0 comments
Open

GO enrichment integral update #18

nicomaper opened this issue Nov 22, 2023 · 0 comments
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@hdbeukel @nicomaper
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data update enhancement New feature or request new release

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@nicomaper
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An integral update surrounding the GO enrichment step of MINI-AC is necessary, which includes:

  • Updated the gene-GO files of both Arabidopsis and maize - related with issues Update of Arabidopsis gene-GO file #16 and Update of maize gene-GO file #17.
  • Update enricher binary script.
  • Update the enricher parameters, especially those related with the background distribution.
  • Update scripts accordingly to change in the header of the enricher output - the header does not start with a "#" anymore, and there is an extra line in the header.
  • Update the test snapshot.
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@nicomaper nicomaper

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data update enhancement New feature or request new release
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@hdbeukel @nicomaper