From 7a296c509fa3855d4be1c6bdab6a6c25f98131d7 Mon Sep 17 00:00:00 2001 From: Young Date: Tue, 20 Jun 2023 16:31:39 -0600 Subject: [PATCH] Update README.md --- README.md | 1 - 1 file changed, 1 deletion(-) diff --git a/README.md b/README.md index 82d371f..c234c1d 100644 --- a/README.md +++ b/README.md @@ -75,7 +75,6 @@ Grandeur wouldn't be possible without the following tools: - [fastani](https://github.com/ParBLiSS/FastANI) - species evaluator - [fastp](https://github.com/OpenGene/fastp) - cleaning reads - [fastqc](https://github.com/s-andrews/FastQC) - fastq file QC -- [fastq-scan](https://github.com/rpetit3/fastq-scan) - quality metrics for fastq files in json format - [iqtree2](http://www.iqtree.org/) - phylogenetic tree creation - used after core genome alignment - [kleborate](https://github.com/katholt/Kleborate) - Klebsiella serotyping - [kraken2](https://ccb.jhu.edu/software/kraken2/) - contamination