diff --git a/ezomero/_importer.py b/ezomero/_importer.py index c62d0bb..b8b4d06 100644 --- a/ezomero/_importer.py +++ b/ezomero/_importer.py @@ -301,6 +301,8 @@ def get_my_image_ids(self) -> Union[List[int], None]: params = Parameters() path_query = self.make_substitutions() path_query = path_query.strip('/') + if path_query.endswith(".zarr"): + path_query = f"{path_query}/.zattrs" params.map = {"cpath": rstring(path_query)} results = q.projection( "SELECT i.id FROM Image i" @@ -468,6 +470,7 @@ def ezimport_ln_s(self) -> bool: '-k', self.conn.getSession().getUuid().val, '-s', self.conn.host, '-p', str(self.conn.port), + '--depth', '10', '--transfer', 'ln_s', str(self.file_path)]) if cli.rv == 0: