Update notebooks in extra
#251
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matt-graham
changed the title
extra for new output file formatextra
matt-graham
commented
Mar 12, 2024
| # ╔═╡ 91e9009c-903f-11ee-2d75-653c9e327f0e | ||
| begin | ||
| using Pkg | ||
| Pkg.activate(".") |
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Look at avoiding sidestepping Pluto's dependency management
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Updates the Jupyter and Pluto notebooks in
extrato be compatible with howParticleDAnow write output files (separate files for simulated observations and filtering estimates, some changes to group names).Rather than previous approach of storing a HDF5 output file
particle_da.h5in the repository, this is removed in favour of now having a separate Pluto notebook / Julia scriptllwd_example.jlwhich will simulated observations from the LLW2d model, run a particle filter and save the simulation and filtering output to HDF5 files.Two notebooks are shown to illustrate loading the generated HDF5 output data and producing visualizations, one in Python as a Jupyter notebook
llw2d_visualizations.ipynband one in Julia as a Pluto notebookllw2d_visualizations.jl.EDIT: Now also added a Pluto notebook
lorenz63_example.jlshowing running filtering with Lorenz 63 model (and producing plots comparable to those in paper).