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$ ghevaluator -u https://usegalaxy.eu/u/helena-rasche/h/cwl-target-history-1 -w https://usegalaxy.eu/u/helena-rasche/w/genome-annotation-with-prokka-feb-2020-imported-from-uploaded-file -a $GALAXY_API_KEY -o out
Traceback (most recent call last):
File "/home/user/arbeit/galaxy/training-material/.direnv/python-3.11/lib64/python3.11/site-packages/requests/models.py", line 971, in json
return complexjson.loads(self.text, **kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/json/__init__.py", line 346, in loads
return _default_decoder.decode(s)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/json/decoder.py", line 337, in decode
obj, end = self.raw_decode(s, idx=_w(s, 0).end())
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/json/decoder.py", line 355, in raw_decode
raise JSONDecodeError("Expecting value", s, err.value) from None
json.decoder.JSONDecodeError: Expecting value: line 5 column 1 (char 4)
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/user/arbeit/galaxy/training-material/.direnv/python-3.11/bin/ghevaluator", line 8, in <module>
sys.exit(main())
^^^^^^
File "/home/user/arbeit/galaxy/training-material/.direnv/python-3.11/lib64/python3.11/site-packages/ghevaluator/__main__.py", line 28, in main
ghevaluator.ghevaluator(
File "/home/user/arbeit/galaxy/training-material/.direnv/python-3.11/lib64/python3.11/site-packages/ghevaluator/__init__.py", line 349, in ghevaluator
ref_wf = get_standard_workflow(wf_url)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/user/arbeit/galaxy/training-material/.direnv/python-3.11/lib64/python3.11/site-packages/ghevaluator/__init__.py", line 70, in get_standard_workflow
return r.json()
^^^^^^^^
File "/home/user/arbeit/galaxy/training-material/.direnv/python-3.11/lib64/python3.11/site-packages/requests/models.py", line 975, in json
raise RequestsJSONDecodeError(e.msg, e.doc, e.pos)
requests.exceptions.JSONDecodeError: Expecting value: line 5 column 1 (char 4)
I considered that maybe it is not trying to interpret the Galaxy URL, and tried with https://usegalaxy.eu/u/helena-rasche/w/genome-annotation-with-prokka-feb-2020-imported-from-uploaded-file/json but that also did not seem to work.
The text was updated successfully, but these errors were encountered:
I considered that maybe it is not trying to interpret the Galaxy URL, and tried with
https://usegalaxy.eu/u/helena-rasche/w/genome-annotation-with-prokka-feb-2020-imported-from-uploaded-file/json
but that also did not seem to work.The text was updated successfully, but these errors were encountered: