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environment.yml
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environment.yml
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name: CaFeNet
channels:
- pytorch
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- alsa-lib=1.2.6.1=h7f98852_0
- aom=3.3.0=h27087fc_1
- attr=2.5.1=h166bdaf_0
- blas=1.0=mkl
- blosc=1.21.1=h83bc5f7_3
- brotli=1.0.9=h166bdaf_7
- brotli-bin=1.0.9=h166bdaf_7
- brotlipy=0.7.0=py38h0a891b7_1004
- brunsli=0.1=h9c3ff4c_0
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- c-blosc2=2.2.0=h7a311fb_0
- ca-certificates=2022.6.15=ha878542_0
- cairo=1.16.0=ha61ee94_1011
- certifi=2022.6.15=py38h578d9bd_0
- cffi=1.15.1=py38h4a40e3a_0
- cfitsio=4.1.0=hd9d235c_0
- charls=2.3.4=h9c3ff4c_0
- charset-normalizer=2.1.0=pyhd8ed1ab_0
- cloudpickle=2.1.0=pyhd8ed1ab_0
- cryptography=37.0.1=py38h9ce1e76_0
- cudatoolkit=11.3.1=h2bc3f7f_2
- cycler=0.11.0=pyhd8ed1ab_0
- cytoolz=0.11.2=py38h0a891b7_2
- dask-core=2022.6.1=pyhd8ed1ab_0
- dbus=1.13.6=h5008d03_3
- expat=2.4.8=h27087fc_0
- ffmpeg=4.4.2=habc3f16_0
- fftw=3.3.10=nompi_h77c792f_102
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.0=h8e229c2_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.34.4=py38h0a891b7_0
- freeglut=3.2.2=h9c3ff4c_1
- freetype=2.10.4=h0708190_1
- fsspec=2022.5.0=pyhd8ed1ab_0
- geos=3.11.0=h27087fc_0
- gettext=0.19.8.1=h73d1719_1008
- giflib=5.2.1=h36c2ea0_2
- glib=2.70.2=h780b84a_4
- glib-tools=2.70.2=h780b84a_4
- gmp=6.2.1=h58526e2_0
- gnutls=3.7.6=hf3e180e_5
- graphite2=1.3.13=h58526e2_1001
- gst-plugins-base=1.20.3=hf6a322e_0
- gstreamer=1.20.3=hd4edc92_0
- harfbuzz=4.4.1=hf9f4e7c_0
- hdf5=1.12.1=nompi_h2386368_104
- icu=70.1=h27087fc_0
- idna=3.3=pyhd8ed1ab_0
- ignite=0.4.9=py_0
- imagecodecs=2022.2.22=py38hd0f120e_6
- imageio=2.19.3=pyhcf75d05_0
- imgaug=0.4.0=pyhd8ed1ab_1
- intel-openmp=2021.4.0=h06a4308_3561
- jack=1.9.18=h8c3723f_1002
- jasper=2.0.33=ha77e612_0
- jpeg=9e=h166bdaf_2
- jxrlib=1.1=h7f98852_2
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.3=py38h43d8883_0
- krb5=1.19.3=h3790be6_0
- lame=3.100=h7f98852_1001
- lcms2=2.12=hddcbb42_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- lerc=3.0=h9c3ff4c_0
- libaec=1.0.6=h9c3ff4c_0
- libavif=0.10.1=h166bdaf_0
- libblas=3.9.0=12_linux64_mkl
- libbrotlicommon=1.0.9=h166bdaf_7
- libbrotlidec=1.0.9=h166bdaf_7
- libbrotlienc=1.0.9=h166bdaf_7
- libcap=2.64=ha37c62d_0
- libcblas=3.9.0=12_linux64_mkl
- libclang=14.0.6=default_h2e3cab8_0
- libclang13=14.0.6=default_h3a83d3e_0
- libcups=2.3.3=hf5a7f15_1
- libcurl=7.83.1=h7bff187_0
- libdb=6.2.32=h9c3ff4c_0
- libdeflate=1.12=h166bdaf_0
- libdrm=2.4.112=h166bdaf_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libevent=2.1.10=h9b69904_4
- libffi=3.4.2=h7f98852_5
- libflac=1.3.4=h27087fc_0
- libgcc-ng=12.1.0=h8d9b700_16
- libgfortran-ng=12.1.0=h69a702a_16
- libgfortran5=12.1.0=hdcd56e2_16
- libglib=2.70.2=h174f98d_4
- libglu=9.0.0=he1b5a44_1001
- libgomp=12.1.0=h8d9b700_16
- libiconv=1.16=h516909a_0
- libidn2=2.3.2=h7f98852_0
- liblapack=3.9.0=12_linux64_mkl
- liblapacke=3.9.0=12_linux64_mkl
- libllvm14=14.0.6=he0ac6c6_0
- libnghttp2=1.47.0=h727a467_0
- libnsl=2.0.0=h7f98852_0
- libogg=1.3.4=h7f98852_1
- libopencv=4.5.5=py38hc65905f_12
- libopus=1.3.1=h7f98852_1
- libpciaccess=0.16=h516909a_0
- libpng=1.6.37=h753d276_3
- libpq=14.4=hd77ab85_0
- libprotobuf=3.20.1=h6239696_0
- libsndfile=1.0.31=h9c3ff4c_1
- libssh2=1.10.0=ha56f1ee_2
- libstdcxx-ng=12.1.0=ha89aaad_16
- libtasn1=4.18.0=h166bdaf_1
- libtiff=4.4.0=hc85c160_1
- libtool=2.4.6=h9c3ff4c_1008
- libudev1=249=h166bdaf_4
- libunistring=0.9.10=h7f98852_0
- libuuid=2.32.1=h7f98852_1000
- libva=2.15.0=h166bdaf_0
- libvorbis=1.3.7=h9c3ff4c_0
- libvpx=1.11.0=h9c3ff4c_3
- libwebp=1.2.2=h3452ae3_0
- libwebp-base=1.2.2=h7f98852_1
- libxcb=1.13=h7f98852_1004
- libxkbcommon=1.0.3=he3ba5ed_0
- libxml2=2.9.14=h22db469_3
- libzlib=1.2.12=h166bdaf_1
- libzopfli=1.0.3=h9c3ff4c_0
- locket=1.0.0=pyhd8ed1ab_0
- lz4-c=1.9.3=h9c3ff4c_1
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py38h95df7f1_0
- mkl_fft=1.3.1=py38h8666266_1
- mkl_random=1.2.2=py38h1abd341_0
- munkres=1.1.4=pyh9f0ad1d_0
- mysql-common=8.0.29=haf5c9bc_1
- mysql-libs=8.0.29=h28c427c_1
- ncurses=6.3=h27087fc_1
- nettle=3.8=hc379101_0
- networkx=2.8.4=pyhd8ed1ab_0
- nspr=4.32=h9c3ff4c_1
- nss=3.78=h2350873_0
- opencv=4.5.5=py38h578d9bd_12
- openh264=2.1.1=h780b84a_0
- openjpeg=2.4.0=hb52868f_1
- openssl=1.1.1q=h166bdaf_0
- p11-kit=0.24.1=hc5aa10d_0
- packaging=21.3=pyhd8ed1ab_0
- pandas=1.4.3=py38h47df419_0
- partd=1.2.0=pyhd8ed1ab_0
- pcre=8.45=h9c3ff4c_0
- pillow=9.2.0=py38h0ee0e06_0
- pip=22.1.2=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- portaudio=19.6.0=h57a0ea0_5
- pthread-stubs=0.4=h36c2ea0_1001
- pulseaudio=14.0=h7f54b18_8
- py-opencv=4.5.5=py38h7f3c49e_12
- pycparser=2.21=pyhd8ed1ab_0
- pyopenssl=22.0.0=pyhd8ed1ab_0
- pyparsing=3.0.9=pyhd8ed1ab_0
- pysocks=1.7.1=py38h578d9bd_5
- python=3.8.13=h582c2e5_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.8=2_cp38
- pytorch=1.12.0=py3.8_cuda11.3_cudnn8.3.2_0
- pytorch-mutex=1.0=cuda
- pytz=2022.1=pyhd8ed1ab_0
- pywavelets=1.3.0=py38h71d37f0_1
- pyyaml=6.0=py38h0a891b7_4
- qt-main=5.15.4=ha5833f6_2
- readline=8.1.2=h0f457ee_0
- requests=2.28.1=pyhd8ed1ab_0
- scikit-image=0.19.3=py38h47df419_0
- scipy=1.8.1=py38h1ee437e_0
- setuptools=63.1.0=py38h578d9bd_0
- shapely=1.8.2=py38h3b45516_3
- six=1.16.0=pyh6c4a22f_0
- snappy=1.1.9=hbd366e4_1
- sqlite=3.39.0=h4ff8645_0
- svt-av1=1.1.0=h27087fc_1
- termcolor=1.1.0=pyhd8ed1ab_3
- tifffile=2022.5.4=pyhd8ed1ab_0
- tk=8.6.12=h27826a3_0
- toolz=0.11.2=pyhd8ed1ab_0
- torchvision=0.13.0=py38_cu113
- typing_extensions=4.3.0=pyha770c72_0
- unicodedata2=14.0.0=py38h0a891b7_1
- urllib3=1.26.10=pyhd8ed1ab_0
- wheel=0.37.1=pyhd8ed1ab_0
- x264=1!161.3030=h7f98852_1
- x265=3.5=h924138e_3
- xcb-util=0.4.0=h166bdaf_0
- xcb-util-image=0.4.0=h166bdaf_0
- xcb-util-keysyms=0.4.0=h166bdaf_0
- xcb-util-renderutil=0.3.9=h166bdaf_0
- xcb-util-wm=0.4.1=h166bdaf_0
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-inputproto=2.3.2=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxi=1.7.10=h7f98852_0
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h7f98852_2
- zfp=0.5.5=h9c3ff4c_8
- zlib=1.2.12=h166bdaf_1
- zlib-ng=2.0.6=h166bdaf_0
- zstd=1.5.2=h8a70e8d_2
- pip:
- click==8.1.3
- contourpy==1.0.7
- docker-pycreds==0.4.0
- einops==0.6.1
- et-xmlfile==1.1.0
- filelock==3.8.2
- gitdb==4.0.9
- gitpython==3.1.27
- huggingface-hub==0.11.1
- importlib-metadata==6.0.0
- importlib-resources==5.12.0
- joblib==1.1.0
- llvmlite==0.39.1
- matplotlib==3.7.0
- msgpack==1.0.4
- msgpack-numpy==0.4.8
- multicoretsne==0.1
- numba==0.56.4
- numpy==1.23.5
- openpyxl==3.1.2
- openslide-python==1.2.0
- pathtools==0.1.2
- promise==2.3
- protobuf==3.20.1
- psutil==5.9.1
- ptflops==0.6.9
- pthflops==0.4.2
- pynndescent==0.5.8
- pyzmq==23.2.1
- scikit-learn==1.1.1
- seaborn==0.11.2
- sentry-sdk==1.6.0
- setproctitle==1.2.3
- shortuuid==1.0.9
- sklearn==0.0
- smmap==5.0.0
- spams==2.6.5.4
- tabulate==0.8.10
- tensorboardx==2.6
- tensorpack==0.11
- thop==0.1.1-2209072238
- threadpool==1.3.2
- threadpoolctl==3.1.0
- timm==0.6.12
- torchstat==0.0.7
- torchsummary==1.5.1
- torchsummaryx==1.3.0
- tqdm==4.64.0
- wandb==0.12.21
- wget==3.2
- zipp==3.14.0
prefix: /compuworks/CafeNet