diff --git a/.github/workflows/tests_linux.yml b/.github/workflows/tests_linux.yml
index 576a9c04b5..b76043bf6a 100644
--- a/.github/workflows/tests_linux.yml
+++ b/.github/workflows/tests_linux.yml
@@ -127,7 +127,7 @@ jobs:
   tests-json-input:
     runs-on: ${{ matrix.os }}
     needs: [sdist, lint]
-    timeout-minutes: 30
+    timeout-minutes: 45
     strategy:
       matrix:
         python-version: [3.9]
diff --git a/.github/workflows/tests_mac.yml b/.github/workflows/tests_mac.yml
index ecf89900c3..21cc092d1b 100644
--- a/.github/workflows/tests_mac.yml
+++ b/.github/workflows/tests_mac.yml
@@ -130,7 +130,7 @@ jobs:
   tests-json-input:
     runs-on: ${{ matrix.os }}
     needs: [sdist, lint]
-    timeout-minutes: 40
+    timeout-minutes: 45
     strategy:
       matrix:
         python-version: [3.9]
diff --git a/.github/workflows/tests_windows.yml b/.github/workflows/tests_windows.yml
index 3858581344..b8816e8279 100644
--- a/.github/workflows/tests_windows.yml
+++ b/.github/workflows/tests_windows.yml
@@ -128,7 +128,7 @@ jobs:
   tests-json-input:
     runs-on: ${{ matrix.os }}
     needs: ["lint"]
-    timeout-minutes: 30
+    timeout-minutes: 45
     strategy:
       matrix:
         python-version: [3.9]
diff --git a/qiskit/providers/aer/backends/aer_simulator.py b/qiskit/providers/aer/backends/aer_simulator.py
index 322bd55696..54f79523be 100644
--- a/qiskit/providers/aer/backends/aer_simulator.py
+++ b/qiskit/providers/aer/backends/aer_simulator.py
@@ -481,8 +481,8 @@ def _default_options(cls):
         return Options(
             # Global options
             shots=1024,
-            method=None,
-            device=None,
+            method='automatic',
+            device='CPU',
             precision="double",
             zero_threshold=1e-10,
             validation_threshold=None,
@@ -498,8 +498,10 @@ def _default_options(cls):
             fusion_threshold=14,
             accept_distributed_results=None,
             blocking_qubits=None,
+            blocking_enable=False,
             memory=None,
             noise_model=None,
+            seed_simulator=None,
             # statevector options
             statevector_parallel_threshold=14,
             statevector_sample_measure_opt=10,
diff --git a/qiskit/providers/aer/backends/aerbackend.py b/qiskit/providers/aer/backends/aerbackend.py
index 38ea67df4c..b5780eeafb 100644
--- a/qiskit/providers/aer/backends/aerbackend.py
+++ b/qiskit/providers/aer/backends/aerbackend.py
@@ -136,18 +136,6 @@ def run(self,
               and direct kwarg's should be used for options to pass them to
               ``run_options``.
         """
-        if isinstance(circuits, (QasmQobj, PulseQobj)):
-            warnings.warn('Using a qobj for run() is deprecated and will be '
-                          'removed in a future release.',
-                          PendingDeprecationWarning,
-                          stacklevel=2)
-            qobj = circuits
-        else:
-            options_dict = {}
-            for key, value in self.options.__dict__.items():
-                if value is not None:
-                    options_dict[key] = value
-            qobj = assemble(circuits, self, **options_dict)
         # DEPRECATED
         if backend_options is not None:
             warnings.warn(
@@ -158,9 +146,19 @@ def run(self,
                 DeprecationWarning,
                 stacklevel=3)
 
+        if isinstance(circuits, (QasmQobj, PulseQobj)):
+            warnings.warn('Using a qobj for run() is deprecated and will be '
+                          'removed in a future release.',
+                          PendingDeprecationWarning,
+                          stacklevel=2)
+            qobj = circuits
+        else:
+            qobj = assemble(circuits, self)
+
         # Add backend options to the Job qobj
-        qobj = self._format_qobj(
+        self._add_options_to_qobj(
             qobj, backend_options=backend_options, **run_options)
+
         # Optional validation
         if validate:
             self._validate(qobj)
@@ -253,9 +251,10 @@ def _run_job(self, job_id, qobj, backend_options, noise_model, validate):
         # type check to swap them back
         if not isinstance(job_id, str) and isinstance(qobj, str):
             job_id, qobj = qobj, job_id
-        run_qobj = self._format_qobj(qobj, backend_options=backend_options,
-                                     noise_model=noise_model)
-        return self._run(run_qobj, job_id)
+        self._add_options_to_qobj(qobj,
+                                  backend_options=backend_options,
+                                  noise_model=noise_model)
+        return self._run(qobj, job_id)
 
     def _run(self, qobj, job_id=''):
         """Run a job"""
@@ -372,9 +371,9 @@ def _set_defaults_option(self, key, value):
         elif key in self._options_defaults:
             self._options_defaults.pop(key)
 
-    def _format_qobj(self, qobj,
-                     backend_options=None,  # DEPRECATED
-                     **run_options):
+    def _add_options_to_qobj(self, qobj,
+                             backend_options=None,  # DEPRECATED
+                             **run_options):
         """Return execution sim config dict from backend options."""
         # Add options to qobj config overriding any existing fields
         config = qobj.config
@@ -395,24 +394,6 @@ def _format_qobj(self, qobj,
 
         return qobj
 
-    def _run_config(
-            self,
-            backend_options=None,  # DEPRECATED
-            **run_options):
-        """Return execution sim config dict from backend options."""
-        # Get sim config
-        run_config = self._options.copy()
-
-        # DEPRECATED backend options
-        if backend_options is not None:
-            for key, val in backend_options.items():
-                run_config[key] = val
-
-        # Override with run-time options
-        for key, val in run_options.items():
-            run_config[key] = val
-        return run_config
-
     def __repr__(self):
         """String representation of an AerBackend."""
         name = self.__class__.__name__
diff --git a/src/controllers/aer_controller.hpp b/src/controllers/aer_controller.hpp
index 26c938b64d..35ff6e4085 100755
--- a/src/controllers/aer_controller.hpp
+++ b/src/controllers/aer_controller.hpp
@@ -124,6 +124,17 @@ class Controller {
   // Simulation precision
   enum class Precision { Double, Single };
 
+  const std::unordered_map<Method, std::string> method_names_ = {
+    {Method::automatic, "automatic"},
+    {Method::statevector, "statevector"},
+    {Method::density_matrix, "density_matrix"},
+    {Method::matrix_product_state, "matrix_product_state"},
+    {Method::stabilizer, "stabilizer"},
+    {Method::extended_stabilizer, "extended_stabilizer"},
+    {Method::unitary, "unitary"},
+    {Method::superop, "superop"}
+  };
+
   //-----------------------------------------------------------------------
   // Config
   //-----------------------------------------------------------------------
@@ -1844,7 +1855,7 @@ void Controller::run_circuit_helper(const Circuit &circ,
 
   // Output data container
   result.set_config(config);
-  result.metadata.add(state.name(), "method");
+  result.metadata.add(method_names_.at(method), "method");
   if (method == Method::statevector || method == Method::density_matrix ||
       method == Method::unitary) {
     result.metadata.add(sim_device_name_, "device");
diff --git a/test/terra/backends/aer_simulator/test_options.py b/test/terra/backends/aer_simulator/test_options.py
new file mode 100644
index 0000000000..9318edd2ca
--- /dev/null
+++ b/test/terra/backends/aer_simulator/test_options.py
@@ -0,0 +1,92 @@
+# This code is part of Qiskit.
+#
+# (C) Copyright IBM 2018, 2021.
+#
+# This code is licensed under the Apache License, Version 2.0. You may
+# obtain a copy of this license in the LICENSE.txt file in the root directory
+# of this source tree or at http://www.apache.org/licenses/LICENSE-2.0.
+#
+# Any modifications or derivative works of this code must retain this
+# copyright notice, and modified files need to carry a notice indicating
+# that they have been altered from the originals.
+"""
+AerSimualtor options tests
+"""
+
+from ddt import ddt
+from qiskit import QuantumCircuit, transpile
+from .aer_simulator_test_case import (
+    AerSimulatorTestCase, supported_methods)
+
+
+@ddt
+class TestOptions(AerSimulatorTestCase):
+    """Tests of AerSimulator options"""
+
+    @supported_methods(
+        ['automatic', 'stabilizer', 'statevector', 'density_matrix',
+         'matrix_product_state', 'extended_stabilizer'])
+    def test_seed_simulator_option_measure(self, method, device):
+        """Test seed_simulator option fixes measurement outcomes"""
+        backend = self.backend(method=method, device=device,
+                               seed_simulator=111)
+        qc = QuantumCircuit(2)
+        qc.h([0, 1])
+        qc.reset(0)
+        qc.measure_all()
+        qc = transpile(qc, backend)
+
+        counts1 = backend.run(qc).result().get_counts(0)
+        counts2 = backend.run(qc).result().get_counts(0)
+
+        self.assertEqual(counts1, counts2)
+
+    @supported_methods(
+        ['automatic', 'stabilizer', 'statevector', 'density_matrix',
+         'matrix_product_state', 'extended_stabilizer'])
+    def test_seed_simulator_run_option_measure(self, method, device):
+        """Test seed_simulator option fixes measurement outcomes"""
+        backend = self.backend(method=method, device=device)
+        qc = QuantumCircuit(2)
+        qc.h([0, 1])
+        qc.reset(0)
+        qc.measure_all()
+        qc = transpile(qc, backend)
+        seed = 1234
+        counts1 = backend.run(qc, seed_simulator=seed).result().get_counts(0)
+        counts2 = backend.run(qc, seed_simulator=seed).result().get_counts(0)
+        self.assertEqual(counts1, counts2)
+
+    @supported_methods(
+        ['automatic', 'stabilizer', 'statevector', 'density_matrix',
+         'matrix_product_state', 'extended_stabilizer', 'unitary', 'superop'])
+    def test_method(self, method, device):
+        """Test seed_simulator option fixes measurement outcomes"""
+        backend = self.backend(method=method, device=device)
+        qc = QuantumCircuit(1)
+        qc.x(0)
+        qc = transpile(qc, backend)
+
+        # Target simulation method
+        if method == 'automatic':
+            target = 'stabilizer'
+        else:
+            target = method
+
+        result = backend.run(qc).result()
+        value = result.results[0].metadata.get('method', None)
+        self.assertEqual(value, target)
+
+    @supported_methods(
+        ['automatic', 'stabilizer', 'statevector', 'density_matrix',
+         'matrix_product_state', 'extended_stabilizer', 'unitary', 'superop'])
+    def test_device(self, method, device):
+        """Test seed_simulator option fixes measurement outcomes"""
+        backend = self.backend(method=method, device=device)
+        qc = QuantumCircuit(1)
+        qc.x(0)
+        qc = transpile(qc, backend)
+
+        result = backend.run(qc).result()
+        value = result.results[0].metadata.get('device', None)
+        self.assertEqual(value, device)
diff --git a/test/terra/extensions/test_wrappers.py b/test/terra/extensions/test_wrappers.py
index 2612320bc8..6099effddd 100644
--- a/test/terra/extensions/test_wrappers.py
+++ b/test/terra/extensions/test_wrappers.py
@@ -50,7 +50,8 @@ def _create_qobj(self, backend, noise_model=None):
         qobj = assemble(transpile(circuit, backend), backend)
         opts = {'max_parallel_threads': 1,
                 'library_dir': LIBRARY_DIR}
-        return backend._format_qobj(qobj, **opts, noise_model=noise_model)
+        backend._add_options_to_qobj(qobj, **opts, noise_model=noise_model)
+        return qobj
 
     def _map_and_test(self, cfunc, qobj):
         n = 2