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mantis setup issue #47

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AAwan2 opened this issue Jul 26, 2023 · 1 comment
Open

mantis setup issue #47

AAwan2 opened this issue Jul 26, 2023 · 1 comment
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bug Something isn't working

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@AAwan2
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AAwan2 commented Jul 26, 2023

Hi,

I installed mantis using conda install which went fine:
conda create -p /tools/Miniconda3/envs/mantis_annotate -c conda-forge -c bioconda mantis_pfa

However, when I run:
mantis setup

I get the following error:
Traceback (most recent call last):
File "/tools/Miniconda3/envs/mantis_annotate/bin/mantis", line 7, in
from mantis.main import main
File "/tools/Miniconda3/envs/mantis_annotate/lib/python3.10/site-packages/mantis/main.py", line 7, in
from mantis.mantis import run_mantis, run_mantis_test, print_citation_mantis, print_version
File "/tools/Miniconda3/envs/mantis_annotate/lib/python3.10/site-packages/mantis/mantis.py", line 110, in
class MANTIS(Multiprocessing):
NameError: name 'Multiprocessing' is not defined

I am unsure what the issue is here and would appreciate some help! Thank you!

@PedroMTQ PedroMTQ added the bug Something isn't working label Dec 21, 2023
@ningyuanlu
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I'm having the same problem.
Cloning into '/data/home/luningyuan/anaconda3/lib/python3.11/site-packages/Resources/UniFunc'...
fatal: unable to access 'https://github.com/PedroMTQ/UniFunc.git/': Empty reply from server
Traceback (most recent call last):
File "/data/home/luningyuan/anaconda3/bin/mantis", line 7, in
from mantis.main import main
File "/data/home/luningyuan/anaconda3/lib/python3.11/site-packages/mantis/main.py", line 7, in
from mantis.mantis import run_mantis, run_mantis_test, print_citation_mantis, print_version
File "/data/home/luningyuan/anaconda3/lib/python3.11/site-packages/mantis/mantis.py", line 110, in
class MANTIS(Multiprocessing):
^^^^^^^^^^^^^^^
NameError: name 'Multiprocessing' is not defined

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3 participants