integration-test.yml

name : Integration Tests
on :
  # allow manual triggering 
  workflow_dispatch:
  
  # for debugging
  push:
  pull_request:

  schedule:
    # run Thursday 4:30 AM UTC
  - cron: '30 4 * * 4'    
jobs:
  test:
    runs-on: ubuntu-20.04

    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
    
    container: 
      image: pecan/base:develop

    steps:
    - name: Checkout source code
      uses: actions/checkout@v3
    - name: CDS API file setup
      run: |
        echo "url: https://cds.climate.copernicus.eu/api/v2" >> .cdsapirc
        echo "key: ${{ secrets.ERA5_API_KEY }}" >> .cdsapirc
    
    - name: Print Output to Console
      run: |
        cat .cdsapirc
     
    - name: Set up Python
      uses: actions/setup-python@v2

    - name: Install dependencies
      run: |
        sudo -H python -m pip install --upgrade pip
        sudo -H pip install cdsapi

    - name: Run tests
      run: |
        for FILE in modules/data.atmosphere/inst/integrationTests/*; do
          Rscript $FILE;
        done