From 6678e246ab735fd82cbba015c00ccea678b8f103 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Armin=20To=CC=88pfer?= Date: Mon, 22 Nov 2021 09:14:04 +0100 Subject: [PATCH] Initial version 2.4.0 changelog --- docs/changelog.md | 18 +++++++++++++++++- docs/index.md | 2 +- 2 files changed, 18 insertions(+), 2 deletions(-) diff --git a/docs/changelog.md b/docs/changelog.md index 509a6b0..3ad2293 100644 --- a/docs/changelog.md +++ b/docs/changelog.md @@ -6,7 +6,23 @@ nav_order: 99 # Version changelog - * **2.2.0**: + * **2.4.0**: + * Fix fasta/q input and `--guess` + * Output empty files for missing barcode pairs `--output-missing-pairs` + * Output each barcode into its own sub-directory `--split-subdirs` + * Passthrough of input ExternalResources in XML + * Add Provenance element to XML output + * Do not override Sample tag `SM` in read group if `--isoseq` is used + * Enable `--reuse-uuids` with `--biosample-csv` + * Add `--reuse-source-uuid` from input XML + * Store BioSamples under WellSample + * Allow `--dataset-name` to override dataset name attribute + + * 2.3.0: + * SMRT Link v10.2 release + * Add `--preset` for `HIFI-SYMMETRIC` and `HIFI-ASYMMETRIC` + + * 2.2.0: * Add `--no-clip` to assign a barcode pair, but not clip barcode sequences from reads * Output `.consensusreadset.xml` for CCS/HiFi input * Add `--biosample-csv` to assign [bio sample names](/faq/biosample) to barcode pairs diff --git a/docs/index.md b/docs/index.md index 2388bba..9f93087 100644 --- a/docs/index.md +++ b/docs/index.md @@ -23,7 +23,7 @@ Please refer to our [official pbbioconda page](https://github.com/PacificBioscie for information on Installation, Support, License, Copyright, and Disclaimer. ## Latest Version -Version **2.1.0**: [Full changelog here](/changelog) +Version **2.4.0**: [Full changelog here](/changelog) ## What's new! New documentation is up, a 1:1 port from the original GitHub docs with minor