diff --git a/snekmer/rules/model.smk b/snekmer/rules/model.smk index 3edbf40..1a239e7 100644 --- a/snekmer/rules/model.smk +++ b/snekmer/rules/model.smk @@ -89,12 +89,15 @@ out_dir = skm.io.define_output_dir( config["alphabet"], config["k"], nested=config["nested_output"] ) + # show warnings if files excluded onstart: [ - skm.utils.check_n_seqs(fa, config["model"]["cv"], show_warning=True) for fa in input_files + skm.utils.check_n_seqs(fa, config["model"]["cv"], show_warning=True) + for fa in input_files ] + # define output files to be created by snekmer rule all: input: