diff --git a/environment.yml b/environment.yml index 0a534bb..48d67d8 100644 --- a/environment.yml +++ b/environment.yml @@ -14,10 +14,10 @@ dependencies: - pandas - seaborn - scikit-learn - - snakemake-minimal == 7.0 + - snakemake == 7.0 - umap-learn - hdbscan - pip - pip: - - -e git+https://github.com/PNNL-CompBio/Snekmer@Abby#egg=snekmer + - -e git+https://github.com/PNNL-CompBio/Snekmer#egg=snekmer diff --git a/environment_Windows.yml b/environment_Windows.yml new file mode 100644 index 0000000..f0f22c8 --- /dev/null +++ b/environment_Windows.yml @@ -0,0 +1,23 @@ +name: snekmer +channels: + - anaconda + - bioconda + - numba + - conda-forge +dependencies: + - python >= 3.9 + - biopython + - matplotlib + - numpy >= 1.22.3 + - numba >= 0.56 + - scipy + - pandas + - seaborn + - scikit-learn + - snakemake-minimal == 7.0 + - umap-learn + - hdbscan + - pip + - pip: + - -e git+https://github.com/PNNL-CompBio/Snekmer#egg=snekmer +