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@LunaSare is interested in a clear indication of whether a tree's branch lengths are based fossil calibration, and whether it's a primary or secondary calibration.
The curation app has several options for a tree’s branch length mode:
Expected number of changes per site
Expected number of changes
Time
Bootstrap values
Posterior support values
Other (describe)
Time requires ‘Time unit’, so we could add a checkbox: ‘[X] Based on fossil calibration’?
OR add a mode ‘Time based on fossil calibration’, expects ‘Time unit’
...and maybe expects ‘Primary calibration’ vs. ‘Secondary calibration’?
The text was updated successfully, but these errors were encountered:
Related question for @LunaSare: What is your intention for this change? Are we hoping that these settings can be read and used in synthesis? If so, we should use distinct and machine-readable values, as opposed to 'Other (describe)'.
@LunaSare is interested in a clear indication of whether a tree's branch lengths are based fossil calibration, and whether it's a primary or secondary calibration.
The curation app has several options for a tree’s branch length mode:
Time requires ‘Time unit’, so we could add a checkbox: ‘[X] Based on fossil calibration’?
OR add a mode ‘Time based on fossil calibration’, expects ‘Time unit’
...and maybe expects ‘Primary calibration’ vs. ‘Secondary calibration’?
The text was updated successfully, but these errors were encountered: