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could you formulate a battle plan on how we could most effectively push COB forward? Maybe an inside out strategy where we COBbify 10-20 core OBO ontologies and then provide instructions to the community to follow suit? I am looking for something like this:
Import COB (keep BFO import? Remove?).
Check that none of your ontology classes fall outside of COB
If they do, request a new (root) term and push push push until it gets in COB
As I see it there is work that needs to happen on 3 largely independent aspects
For 1, let us keep our efforts focused on the end goal of enabling individual ontologies to completely use COB as the sole upper ontology, as currently documented here:
This page highlights some of the challenges, some of which are described in GitHub issues here, e.g. #213 (we could do with some organization of our issues, so that it's easy to see all technical blockers)
2. Increasing coverage across OBO
For 2, @cthoyt suggests doing this in concert with http://purl.obolibrary.org/obo/IAO_0000700 which is a great idea (I think we should actually make this a dashboard requirement - and this makes the ontology much more friendly in OLS even without COB). Note that 2 may depend somewhat on 3:
We all know which ones these are. Let's keep discussing these - but keep them on the relevant issue, which should be easy to find (again, some organization would help here).
If we want to discuss a general strategy for addressing these issues - e.g. Schulzian conflation - then let's make a separate issue for these.
Let's use this issue here for discussing high level strategy, and formal criteria for what success or a series of small wins looks like.
The text was updated successfully, but these errors were encountered:
from slack discussion
As I see it there is work that needs to happen on 3 largely independent aspects
Help is appreciated on all these aspects
1. Technical-logical-release-management
For 1, let us keep our efforts focused on the end goal of enabling individual ontologies to completely use COB as the sole upper ontology, as currently documented here:
https://obofoundry.org/COB/using-cob/
This page highlights some of the challenges, some of which are described in GitHub issues here, e.g. #213 (we could do with some organization of our issues, so that it's easy to see all technical blockers)
2. Increasing coverage across OBO
For 2, @cthoyt suggests doing this in concert with http://purl.obolibrary.org/obo/IAO_0000700 which is a great idea (I think we should actually make this a dashboard requirement - and this makes the ontology much more friendly in OLS even without COB). Note that 2 may depend somewhat on 3:
3. Solving intractable upper ontology modeling issues
We all know which ones these are. Let's keep discussing these - but keep them on the relevant issue, which should be easy to find (again, some organization would help here).
If we want to discuss a general strategy for addressing these issues - e.g. Schulzian conflation - then let's make a separate issue for these.
Let's use this issue here for discussing high level strategy, and formal criteria for what success or a series of small wins looks like.
The text was updated successfully, but these errors were encountered: