Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

error in Salphogome_v3 #7

Open
kleblanc5909 opened this issue Jan 11, 2019 · 0 comments
Open

error in Salphogome_v3 #7

kleblanc5909 opened this issue Jan 11, 2019 · 0 comments

Comments

@kleblanc5909
Copy link
Collaborator

In the second block:

Edit the locations below to the location of your two results folders.

files_disease = glob.glob('ptyphi_results/*species.txt')
files_control = glob.glob('typhi_results/*species.txt')

location_of_fasta = 'databases/just_viruses/just_viruses.fasta'

'databases/just_viruses/just_viruses.fasta' does not exist. Please update the location_of_fasta

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant