diff --git a/flow_dispatch/link_analyses.cwl b/flow_dispatch/link_analyses.cwl
new file mode 100644
index 0000000..bb2f7ed
--- /dev/null
+++ b/flow_dispatch/link_analyses.cwl
@@ -0,0 +1,26 @@
+#!usr/bin/env cwl-runner
+
+cwlVersion: v1.0
+class: CommandLineTool
+
+requirements:
+  - class: InlineJavascriptRequirement
+
+baseCommand: [ln]
+arguments:
+  - prefix: -si
+    position: 1
+    valueFrom: ../../scaffold/analyses
+  - prefix: -t
+    position: 3
+    valueFrom: $(inputs.PATH[0])/$(inputs.tree[0])/$(inputs.tree[1])/jbrowse/data
+
+inputs:
+  in_dummy: 
+    type: File
+  PATH:
+    type: string[]
+  tree:
+    type: string[]
+
+outputs: []
diff --git a/flow_dispatch/workflow.cwl b/flow_dispatch/workflow.cwl
index 3ae8666..22f224b 100644
--- a/flow_dispatch/workflow.cwl
+++ b/flow_dispatch/workflow.cwl
@@ -103,6 +103,13 @@ steps:
       PATH: PATH
       tree: tree
     out: []
+  link_analyses:
+    run: link_analyses.cwl
+    in:
+      in_dummy: setup_folder/out_dummy
+      PATH: PATH
+      tree: tree
+    out: []
 outputs: 
   out_dummy:
     type: File