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Jupyter Notebook to Reproduce Lovastatin Results #59

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jlaw9 opened this issue Jan 11, 2018 · 0 comments
Open

Jupyter Notebook to Reproduce Lovastatin Results #59

jlaw9 opened this issue Jan 11, 2018 · 0 comments

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@jlaw9
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jlaw9 commented Jan 11, 2018

Create a jupyter notebook so anyone can use it to recreate the results of the pathlinker app paper and understand each step. The notebook should describe what the inputs we use are and where they are from. It should also describe the resulting network (preferably mapped to gene names if cytoscape automation allows that) and, if possible, perform the ClueGO analysis as well.

@jlaw9 jlaw9 changed the title Jupyter Notebook to re-create and follow the PathLinker App paper use case Jupyter Notebook Reproduce Lovastatin Results Jan 11, 2018
@jlaw9 jlaw9 changed the title Jupyter Notebook Reproduce Lovastatin Results Jupyter Notebook to Reproduce Lovastatin Results Jan 11, 2018
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