Singularity.6.0.2-Cuda8-xtract_viewer

Bootstrap: docker
From: gw000/debian-cuda:8.0_7.0

%labels
    AUTHOR krause@mpib-berlin.mpg.de

# missing in 6.0.2 release, deprecated for 6.0.3
%files
    data/xtract_viewer /root/xtract_viewer

%post
    apt-get update
    apt-get -y install wget python-minimal libgomp1 ca-certificates \
            libglu1-mesa libgl1-mesa-glx libsm6 libice6 libxt6 \
            libjpeg62-turbo libpng16-16 libxrender1 libxcursor1 \
            libxinerama1 libfreetype6 libxft2 libxrandr2 libmng1 \
            libgtk2.0-0 libpulse0 libasound2 libcaca0 libopenblas-base \
            bzip2 dc bc
    wget https://fsl.fmrib.ox.ac.uk/fsldownloads/fslinstaller.py
    python2 fslinstaller.py -d /usr/local/fsl -V 6.0.2
    echo '/usr/local/fsl/lib' > /etc/ld.so.conf.d/fsl.conf
    ldconfig
    apt-get clean && apt-get -y autoremove
    mv /root/xtract_viewer /usr/local/fsl/bin/

%environment
    FSLDIR=/usr/local/fsl
    . ${FSLDIR}/etc/fslconf/fsl.sh
    PATH=${FSLDIR}/bin:${PATH}
    export FSLDIR PATH