build-bindings.yml

name: binding-tests

on:
  push:
    branches:
      - release
      - main
  pull_request: {}

env:
  CONDA_CACHE_NUMBER: 0  # increase to reset cache manually

jobs:
  build-tests:
    runs-on: ubuntu-latest
    steps:

      - name: Store Date
        shell: bash -l {0}
        run: echo "DATE=$(date +'%Y%m%d')" >> $GITHUB_ENV

      - name: Checkout MParT
        uses: actions/checkout@v3
        with:
          path: mpart

      - name: Use Conda
        uses: conda-incubator/setup-miniconda@v2
        with:
          miniforge-variant: Mambaforge
          miniforge-version: latest
          activate-environment: test
          use-mamba: true
          auto-update-conda: true
          python-version: "3.8"

      - name: Cache Conda Deps
        uses: actions/cache@v3
        id: cache-conda
        with:
          path: /usr/share/miniconda3/envs/test
          key: cache-conda-${{ hashFiles('mpart/.github/environment.yml') }}-${{ env.DATE }}-${{ env.CONDA_CACHE_NUMBER }}-BINDINGS

      - name: Install Conda Dependencies
        shell: bash -l {0}
        run: mamba env update -n test -f $GITHUB_WORKSPACE/mpart/.github/environment.yml
        if: steps.cache-conda.outputs.cache-hit != 'true'

      - name: Setup Julia
        run: |
          julia -e "using Pkg; Pkg.add([Pkg.PackageSpec(;name=\"CxxWrap\",version=v\"0.14.2\"),Pkg.PackageSpec(;name=\"TestReports\")])"
          export GITHUB_JULIA_PATH=$(julia -e "println(DEPOT_PATH[1])")
          echo -n $'[bee5971c-294f-5168-9fcd-9fb3c811d495]\nMParT = \"' >> $GITHUB_JULIA_PATH/artifacts/Overrides.toml
          echo -n $GITHUB_WORKSPACE                                     >> $GITHUB_JULIA_PATH/artifacts/Overrides.toml
          echo -n "/MPART_INSTALL\""                                    >> $GITHUB_JULIA_PATH/artifacts/Overrides.toml

      - name: Set up MATLAB
        uses: matlab-actions/setup-matlab@v1

      - name: Cache Kokkos
        uses: actions/cache@v3
        id: cache-kokkos
        with:
          path: "${{ github.workspace }}/KOKKOS_INSTALL"
          key: kokkos4.2.00

      - if: ${{steps.cache-kokkos.outputs.cache-hit != 'true'}}
        name: Checkout Kokkos
        uses: actions/checkout@v3
        with:
          repository: kokkos/kokkos
          path: kokkos
          ref: '4.2.00'

      - if: ${{steps.cache-kokkos.outputs.cache-hit != 'true'}}
        name: Install Kokkos
        run: |
          cd $GITHUB_WORKSPACE/kokkos
          mkdir build && cd build
          cmake -DKokkos_ENABLE_THREADS=ON \
                -DBUILD_SHARED_LIBS=ON     \
                -DKokkos_ENABLE_SERIAL=ON  \
                -DCMAKE_CXX_STANDARD=17    \
                -DCMAKE_INSTALL_PREFIX=$GITHUB_WORKSPACE/KOKKOS_INSTALL/ \
                ../
          sudo make -j2 install

      - name: Configure MParT
        shell: bash -l {0}
        run: |
          cd $GITHUB_WORKSPACE/mpart
          mkdir build && cd build
          cmake -DKokkos_DIR=$GITHUB_WORKSPACE/KOKKOS_INSTALL/lib/cmake/Kokkos \
                -DMPART_FETCH_DEPS=OFF \
                -DCMAKE_INSTALL_PREFIX=$GITHUB_WORKSPACE/MPART_INSTALL/ \
                ../

      - name: Build MParT
        shell: bash -l {0}
        run: cd $GITHUB_WORKSPACE/mpart/build; make -j2 install

      - name: Run Python Tests
        continue-on-error: true
        shell: bash -l {0}
        run: |
          export PYTHONPATH=$PYTHONPATH:$GITHUB_WORKSPACE/MPART_INSTALL/python
          export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$GITHUB_WORKSPACE/MPART_INSTALL/python:$GITHUB_WORKSPACE/MPART_INSTALL/lib
          pytest $GITHUB_WORKSPACE/mpart/bindings/python/tests -v --junitxml="$GITHUB_WORKSPACE/test-results-python.xml"

      - name: Run Julia Tests
        continue-on-error: true
        shell: bash -l {0}
        run: |
          julia -e "using Pkg; Pkg.add(url=\"https://github.com/MeasureTransport/MParT.jl\"); using TestReports; TestReports.test(\"MParT\",logfilepath=ENV[\"GITHUB_WORKSPACE\"], logfilename=\"test-results-julia.xml\")"

      - name: Setup Matlab Tests
        continue-on-error: true
        shell: bash -l {0}
        run: |
          export LD_LIBRARY_PATH=/usr/local/lib64:$LD_LIBRARY_PATH
          sed -i "1s|^|addpath(genpath(\'$GITHUB_WORKSPACE/MPART_INSTALL\'))\n|" $GITHUB_WORKSPACE/mpart/bindings/matlab/tests/runtests.m
          cat $GITHUB_WORKSPACE/mpart/bindings/matlab/tests/runtests.m

      - name: Run Matlab Tests
        continue-on-error: true
        uses: matlab-actions/run-command@v1
        with:
          command: addpath('${{ github.workspace }}/mpart/bindings/matlab/tests/'), runtests

      - name: Publish Unit Test Results
        uses: EnricoMi/publish-unit-test-result-action@v2
        if: always()
        with:
          check_name: "Test Results with Bindings"
          junit_files: ${{ github.workspace }}/test-results-*.xml